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Explore how to setup an epileptic seizure simulation with the TVB graphical user interface. This lesson will show you how to program the epileptor model in the brain network to simulate a epileptic seizure originating in the hippocampus. It will also show how to upload and view mouse connectivity data, as well as give a short introduction to the python script interface of TVB.

Difficulty level: Intermediate
Duration: 58:06
Speaker: : Paul Triebkorn

In this lesson you will learn how to simulate seizure events and epilepsy in The Virtual Brain. We will look at the paper On the Nature of Seizure Dynamics, which describes a new local model called the Epileptor, and apply this same model in The Virtual Brain. This is part 1 of 2 in a series explaining how to use the Epileptor. In this part, we focus on setting up the parameters.

Difficulty level: Beginner
Duration: 4:44
Speaker: : Paul Triebkorn

This is a tutorial on designing a Bayesian inference model to map belief trajectories, with emphasis on gaining familiarity with Hierarchical Gaussian Filters (HGFs).

 

This lesson corresponds to slides 65-90 of the PDF below. 

Difficulty level: Intermediate
Duration: 1:15:04
Speaker: : Daniel Hauke

In this lesson, you will learn about the current challenges facing the integration of machine learning and neuroscience. 

Difficulty level: Beginner
Duration: 5:42
Speaker: : Dan Goodman

This demonstration walks through how to import your data into MATLAB.

Difficulty level: Beginner
Duration: 6:10
Speaker: : MATLAB®

This lesson provides instruction regarding the various factors one must consider when preprocessing data, preparing it for statistical exploration and analyses. 

Difficulty level: Beginner
Duration: 15:10
Speaker: : MATLAB®

This tutorial outlines, step by step, how to perform analysis by group and how to do change-point detection.

Difficulty level: Beginner
Duration: 2:49
Speaker: : MATLAB®

This tutorial walks through several common methods for visualizing your data in different ways depending on your data type.

Difficulty level: Beginner
Duration: 6:10
Speaker: : MATLAB®

This tutorial illustrates several ways to approach predictive modeling and machine learning with MATLAB.

Difficulty level: Beginner
Duration: 6:27
Speaker: : MATLAB®

This brief tutorial goes over how you can easily work with big data as you would with any size of data.

Difficulty level: Beginner
Duration: 3:55
Speaker: : MATLAB®

In this tutorial, you will learn how to deploy your models outside of your local MATLAB environment, enabling wider sharing and collaboration.

Difficulty level: Beginner
Duration: 3:52
Speaker: : MATLAB®

This lesson provides a brief overview of the Python programming language, with an emphasis on tools relevant to data scientists.

Difficulty level: Beginner
Duration: 1:16:36
Speaker: : Tal Yarkoni

This tutorial covers the fundamentals of collaborating with Git and GitHub.

Difficulty level: Intermediate
Duration: 2:15:50
Speaker: : Elizabeth DuPre

The lecture provides an overview of the core skills and practical solutions required to practice reproducible research.

Difficulty level: Beginner
Duration: 1:25:17
Speaker: : Fernando Perez

This lecture covers the description and brief history of data science and its use in neuroinformatics.

Difficulty level: Beginner
Duration: 11:15
Speaker: : Ariel Rokem

This lesson provides an overview of self-supervision as it relates to neural data tasks and the Mine Your Own vieW (MYOW) approach.

Difficulty level: Beginner
Duration: 25:50
Speaker: : Eva Dyer

This video gives a short introduction to the EBRAINS data sharing platform, why it was developed, and how it contributes to open data sharing.

Difficulty level: Beginner
Duration: 17:32
Speaker: : Ida Aasebø

This video introduces the key principles for data organization and explains how you could make your data FAIR for data sharing on EBRAINS.

Difficulty level: Beginner
Duration: 10:54
Course:

An introduction to data management, manipulation, visualization, and analysis for neuroscience. Students will learn scientific programming in Python, and use this to work with example data from areas such as cognitive-behavioral research, single-cell recording, EEG, and structural and functional MRI. Basic signal processing techniques including filtering are covered. The course includes a Jupyter Notebook and video tutorials.

 

Difficulty level: Beginner
Duration: 1:09:16
Speaker: : Aaron J. Newman

This lesson provides a hands-on tutorial for generating simulated brain data within the EBRAINS ecosystem. 

Difficulty level: Beginner
Duration: 32:58
Speaker: : Jil Meier