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This lecture covers the NIDM data format within BIDS to make your datasets more searchable, and how to optimize your dataset searches.

Difficulty level: Beginner
Duration: 12:33
Speaker: : David Keator

This lecture covers positron emission tomography (PET) imaging and the Brain Imaging Data Structure (BIDS), and how they work together within the PET-BIDS standard to make neuroscience more open and FAIR.

Difficulty level: Beginner
Duration: 12:06
Speaker: : Melanie Ganz

This lecture discusses how to standardize electrophysiology data organization to move towards being more FAIR.

Difficulty level: Beginner
Duration: 15:51

Hierarchical Event Descriptors (HED) fill a major gap in the neuroinformatics standards toolkit, namely the specification of the nature(s) of events and time-limited conditions recorded as having occurred during time series recordings (EEG, MEG, iEEG, fMRI, etc.). Here, the HED Working Group presents an online INCF workshop on the need for, structure of, tools for, and use of HED annotation to prepare neuroimaging time series data for storing, sharing, and advanced analysis. 

     

    Difficulty level: Beginner
    Duration: 03:37:42
    Speaker: :

    In this lesson, attendees will learn about the data structure standards, specifically the Brain Imaging Data Structure (BIDS), an INCF-endorsed standard for organizing, annotating, and describing data collected during neuroimaging experiments. 

    Difficulty level: Beginner
    Duration: 21:56
    Speaker: : Michael Schirner

    This lesson contains both a lecture and a tutorial component. The lecture (0:00-20:03 of YouTube video) discusses both the need for intersectional approaches in healthcare as well as the impact of neglecting intersectionality in patient populations. The lecture is followed by a practical tutorial in both Python and R on how to assess intersectional bias in datasets. Links to relevant code and data are found below. 

    Difficulty level: Beginner
    Duration: 52:26
    Course:

    Maximize Your Research With Cloud Workspaces is a talk aimed at researchers who are looking for innovative ways to set up and execute their life science data analyses in a collaborative, extensible, open-source cloud environment. This panel discussion is brought to you by MetaCell and scientists from leading universities who share their experiences of advanced analysis and collaborative learning through the Cloud.

     

    Difficulty level: Beginner
    Duration: 55:43

    This talk enumerates the challenges regarding data accessibility and reusability inherent in the current scientific publication system, and discusses novel approaches to these challenges, such as the EBRAINS Live Papers platform. 

    Difficulty level: Beginner
    Duration: 18:08
    Speaker: : Andrew Davison

    In this lesson, you will learn about how team science unfolds in practice, as well as what are the standards and best practices used by teams, and how well these best practices function and support scientific output. 

    Difficulty level: Beginner
    Duration: 15:21
    Speaker: : Hannah Bayer

    In this lesson, you will learn about approaches to make the field of neuroscience more open and fair, particularly regarding the integration of equality, diversity, and inclusion (EDI) as guiding principles for team collaboration. 

    Difficulty level: Beginner
    Duration: 14:11
    Speaker: : Karin Grasenick

    This lesson discusses the topic of credit and contribution in open and FAIR neuroscience, looking through the respective lenses of systems, teams, and people. 

    Difficulty level: Beginner
    Duration: 24:34
    Speaker: : Tanya Brown

    In this talk, you will hear about the challenges and costs of being FAIR in the many scientific fields, as well as opportunities to transform the ecology of the academic crediting system. 

    Difficulty level: Beginner
    Duration: 14:56
    Speaker: : Zefan Zheng

    In this lightning talk, you will learn about BrainGlobe, an initiative which exists to facilitate the development of interoperable Python-based tools for computational neuroanatomy.

    Difficulty level: Beginner
    Duration: 3:33

    This lesson consists of a panel discussion, wrapping up the INCF Neuroinformatics Assembly 2023 workshop Research Workflows for Collaborative Neuroscience

    Difficulty level: Beginner
    Duration: 25:33
    Speaker: :

    This talk gives an overview of the complicated nature of sharing of neuroscientific data in an environment of numerous and often conflicting legal systems around the world. 

    Difficulty level: Beginner
    Duration: 14:00
    Speaker: : Franco Pestilli

    This talk provides an overview of the FAIR-aligned efforts of MATLAB and MathWorks, from the technological building blocks to the open science coordination involved in facilitating greater transparency and efficiency in neuroscience and neuroinformatics. 

    Difficulty level: Beginner
    Duration: 15:41
    Speaker: : Vijay Iyer

    This brief video provides an introduction to brainlife.io, a free cloud computing platform for neuroimaging data analysis. 

    Difficulty level: Beginner
    Duration: 2:41
    Speaker: :

    This video will document the process of uploading data into a brainlife project using ezBIDS.

    Difficulty level: Beginner
    Duration: 6:15
    Speaker: :

    This lesson visually documents the process of uploading data to brainlife via the command line interface (CLI). 

    Difficulty level: Beginner
    Duration: 1:28
    Speaker: :