This video will document the process of running an app on brainlife, from data staging to archiving of the final data outputs.
This quick video presents some of the various visualizers available on brainlife.io
This short video shows how a brainlife.io publication can be opened from the Data Deposition page of the journal Nature Scientific Data.
An introduction to data management, manipulation, visualization, and analysis for neuroscience. Students will learn scientific programming in Python, and use this to work with example data from areas such as cognitive-behavioral research, single-cell recording, EEG, and structural and functional MRI. Basic signal processing techniques including filtering are covered. The course includes a Jupyter Notebook and video tutorials.
This lesson contains the first part of the lecture Data Science and Reproducibility. You will learn about the development of data science and what the term currently encompasses, as well as how neuroscience and data science intersect.
In this second part of the lecture Data Science and Reproducibility, you will learn how to apply the awareness of the intersection between neuroscience and data science (discussed in part one) to an understanding of the current reproducibility crisis in biomedical science and neuroscience.
In this lesson, you will learn about the current challenges facing the integration of machine learning and neuroscience.
JupyterHub is a simple, highly extensible, multi-user system for managing per-user Jupyter Notebook servers, designed for research groups or classes. This lecture covers deploying JupyterHub on a single server, as well as deploying with Docker using GitHub for authentication.
This demonstration walks through how to import your data into MATLAB.
This lesson provides instruction regarding the various factors one must consider when preprocessing data, preparing it for statistical exploration and analyses.
This tutorial outlines, step by step, how to perform analysis by group and how to do change-point detection.
This tutorial walks through several common methods for visualizing your data in different ways depending on your data type.
This tutorial illustrates several ways to approach predictive modeling and machine learning with MATLAB.
This brief tutorial goes over how you can easily work with big data as you would with any size of data.
In this tutorial, you will learn how to deploy your models outside of your local MATLAB environment, enabling wider sharing and collaboration.
This lesson provides a brief overview of the Python programming language, with an emphasis on tools relevant to data scientists.
This lecture gives an introduction to the FAIR (findability, accessibility, interoperability, and reusability) science principles and examples of their application in neuroscience research.
The lecture provides an overview of the core skills and practical solutions required to practice reproducible research.
This lecture covers the description and brief history of data science and its use in neuroinformatics.
This lesson provides an overview of self-supervision as it relates to neural data tasks and the Mine Your Own vieW (MYOW) approach.