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This lesson provides an overview of the current status in the field of neuroscientific ontologies, presenting examples of data organization and standards, particularly from neuroimaging and electrophysiology. 

Difficulty level: Intermediate
Duration: 33:41

This lecture covers the NIDM data format within BIDS to make your datasets more searchable, and how to optimize your dataset searches.

Difficulty level: Beginner
Duration: 12:33
Speaker: : David Keator

This lecture covers positron emission tomography (PET) imaging and the Brain Imaging Data Structure (BIDS), and how they work together within the PET-BIDS standard to make neuroscience more open and FAIR.

Difficulty level: Beginner
Duration: 12:06
Speaker: : Melanie Ganz

This lecture discusses how to standardize electrophysiology data organization to move towards being more FAIR.

Difficulty level: Beginner
Duration: 15:51

Hierarchical Event Descriptors (HED) fill a major gap in the neuroinformatics standards toolkit, namely the specification of the nature(s) of events and time-limited conditions recorded as having occurred during time series recordings (EEG, MEG, iEEG, fMRI, etc.). Here, the HED Working Group presents an online INCF workshop on the need for, structure of, tools for, and use of HED annotation to prepare neuroimaging time series data for storing, sharing, and advanced analysis. 

     

    Difficulty level: Beginner
    Duration: 03:37:42
    Speaker: :

    In this lesson, attendees will learn about the data structure standards, specifically the Brain Imaging Data Structure (BIDS), an INCF-endorsed standard for organizing, annotating, and describing data collected during neuroimaging experiments. 

    Difficulty level: Beginner
    Duration: 21:56
    Speaker: : Michael Schirner

    This lesson provides an overview of how to construct computational pipelines for neurophysiological data using DataJoint.

    Difficulty level: Beginner
    Duration: 17:37
    Speaker: : Dimitri Yatsenko

    This lesson delves into the the structure of one of the brain's most elemental computational units, the neuron, and how said structure influences computational neural network models. 

    Difficulty level: Intermediate
    Duration: 6:33
    Speaker: : Marcus Ghosh

    Following the previous lesson on neuronal structure, this lesson discusses neuronal function, particularly focusing on spike triggering and propogation. 

    Difficulty level: Intermediate
    Duration: 6:58
    Speaker: : Marcus Ghosh

    This lesson goes over the basic mechanisms of neural synapses, the space between neurons where signals may be transmitted. 

    Difficulty level: Intermediate
    Duration: 7:03
    Speaker: : Marcus Ghosh

    While the previous lesson in the Neuro4ML course dealt with the mechanisms involved in individual synapses, this lesson discusses how synapses and their neurons' firing patterns may change over time. 

    Difficulty level: Intermediate
    Duration: 4:48
    Speaker: : Marcus Ghosh

    Whereas the previous two lessons described the biophysical and signalling properties of individual neurons, this lesson describes properties of those units when part of larger networks. 

    Difficulty level: Intermediate
    Duration: 6:00
    Speaker: : Marcus Ghosh

    This lesson covers the ionic basis of the action potential, including the Hodgkin-Huxley model. 

    Difficulty level: Beginner
    Duration: 28:29
    Speaker: : Carl Petersen

    This lesson provides an introduction to the myriad forms of cellular mechanisms whicn underpin healthy brain function and communication. 

    Difficulty level: Beginner
    Duration: 12:20
    Speaker: : Carl Petersen

    In this lesson you will learn about the ionic basis of the action potential, including the Hodgkin-Huxley model. 

    Difficulty level: Beginner
    Duration: 28:29
    Speaker: : Carl Petersen

    This lesson provides an introduction to the course Cellular Mechanisms of Brain Function.

    Difficulty level: Beginner
    Duration: 12:20
    Speaker: : Carl Petersen

    This lesson covers membrane potential of neurons, and how parameters around this potential have direct consequences on cellular communication at both the individual and population level. 

    Difficulty level: Beginner
    Duration: 28:08
    Speaker: : Carl Petersen

    This lesson covers the spatiotemporal dynamics of the membrane potential.

    Difficulty level: Beginner
    Duration: 19:14
    Speaker: : Carl Petersen

    In this lesson you will learn about neurons' ability to generate signals called action potentials, and biophysics of voltage-gated ion channels.

    Difficulty level: Beginner
    Duration: 27:47
    Speaker: : Carl Petersen

    This lesson discusses voltage-gating kinetics of sodium and potassium channels.

    Difficulty level: Beginner
    Duration: 19:20
    Speaker: : Carl Petersen