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This talk describes the NIH-funded SPARC Data Structure, and how this project navigates ontology development while keeping in mind the FAIR science principles. 

Difficulty level: Beginner
Duration: 25:44
Speaker: : Fahim Imam

This lesson provides an overview of the current status in the field of neuroscientific ontologies, presenting examples of data organization and standards, particularly from neuroimaging and electrophysiology. 

Difficulty level: Intermediate
Duration: 33:41

This lesson continues from part one of the lecture Ontologies, Databases, and Standards, diving deeper into a description of ontologies and knowledg graphs. 

Difficulty level: Intermediate
Duration: 50:18
Speaker: : Jeff Grethe
Course:

This lecture covers structured data, databases, federating neuroscience-relevant databases, and ontologies. 

Difficulty level: Beginner
Duration: 1:30:45
Speaker: : Maryann Martone

This lecture covers FAIR atlases, including their background and construction, as well as how they can be created in line with the FAIR principles.

Difficulty level: Beginner
Duration: 14:24
Speaker: : Heidi Kleven

This lecture focuses on ontologies for clinical neurosciences.

Difficulty level: Intermediate
Duration: 21:54

This lecture covers the NIDM data format within BIDS to make your datasets more searchable, and how to optimize your dataset searches.

Difficulty level: Beginner
Duration: 12:33
Speaker: : David Keator

This lecture covers positron emission tomography (PET) imaging and the Brain Imaging Data Structure (BIDS), and how they work together within the PET-BIDS standard to make neuroscience more open and FAIR.

Difficulty level: Beginner
Duration: 12:06
Speaker: : Melanie Ganz

This lecture discusses how to standardize electrophysiology data organization to move towards being more FAIR.

Difficulty level: Beginner
Duration: 15:51

Hierarchical Event Descriptors (HED) fill a major gap in the neuroinformatics standards toolkit, namely the specification of the nature(s) of events and time-limited conditions recorded as having occurred during time series recordings (EEG, MEG, iEEG, fMRI, etc.). Here, the HED Working Group presents an online INCF workshop on the need for, structure of, tools for, and use of HED annotation to prepare neuroimaging time series data for storing, sharing, and advanced analysis. 

     

    Difficulty level: Beginner
    Duration: 03:37:42
    Speaker: :

    In this lesson, attendees will learn about the data structure standards, specifically the Brain Imaging Data Structure (BIDS), an INCF-endorsed standard for organizing, annotating, and describing data collected during neuroimaging experiments. 

    Difficulty level: Beginner
    Duration: 21:56
    Speaker: : Michael Schirner

    This lesson contains practical exercises which accompanies the first few lessons of the Neuroscience for Machine Learners (Neuro4ML) course. 

    Difficulty level: Intermediate
    Duration: 5:58
    Speaker: : Dan Goodman

    This video briefly goes over the exercises accompanying Week 6 of the Neuroscience for Machine Learners (Neuro4ML) course, Understanding Neural Networks.

    Difficulty level: Intermediate
    Duration: 2:43
    Speaker: : Marcus Ghosh
    Course:

    This lecture covers the description and characterization of an input-output relationship in a information-theoretic context. 

    Difficulty level: Beginner
    Duration: 1:35:33

    This lesson is part 1 of 2 of a tutorial on statistical models for neural data.

    Difficulty level: Beginner
    Duration: 1:45:48
    Speaker: : Jonathan Pillow

    This lesson is part 2 of 2 of a tutorial on statistical models for neural data.

    Difficulty level: Beginner
    Duration: 1:50:31
    Speaker: : Jonathan Pillow

    This lesson provides an introduction to modeling single neurons, as well as stability analysis of neural models.

    Difficulty level: Intermediate
    Duration: 1:26:06
    Speaker: : Bard Ermentrout

    This lesson continues a thorough description of the concepts, theories, and methods involved in the modeling of single neurons. 

    Difficulty level: Intermediate
    Duration: 1:25:38
    Speaker: : Bard Ermentrout

    In this lesson you will learn about fundamental neural phenomena such as oscillations and bursting, and the effects these have on cortical networks. 

    Difficulty level: Intermediate
    Duration: 1:24:30
    Speaker: : Bard Ermentrout

    This lesson continues discussing properties of neural oscillations and networks. 

    Difficulty level: Intermediate
    Duration: 1:31:57
    Speaker: : Bard Ermentrout