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Neuroscience for Machine Learners (Neuro4ML)

Neural Reckoning Group

This is a freely available online course on neuroscience for people with a machine learning background. The aim is to bring together these two fields that have a shared goal in understanding intelligent processes. Rather than pushing for “neuroscience-inspired” ideas in machine learning, the idea is to broaden the conceptions of both fields to incorporate elements of the other in the hope that this will lead to new, creative thinking.

 

Dynamical Neural Systems

ICTS

This course consists of several introductory lectures on different aspects of biochemical models. The lectures cover topics such as stability analysis of neural models, oscillations and bursting, and weakly coupled oscillators. You will learn about modeling various scales and properties of neural mechanisms, from firing-rate models of single neurons to pattern generation in visual system hallucinations. 

 

FAIR Approaches for Neuroimaging Research

INCF

Over the last three decades, neuroimaging research has seen large strides in the scale, diversity, and complexity of studies, the open availability of data and methodological resources, the quality of instrumentation and multimodal studies, and the number of researchers and consortia. The awareness of rigor and reproducibility has increased with the advent of funding mandates, and with the work done by national and international brain initiatives.

 

Statistical Models

COSYNE

This course consists of two introductory lectures on different aspects of statistical models, in which you will learn about the neural coding problem, aspects of neural activity carry information, multiple spike train models, latent variable models, and regularization. 

 
INCF TrainingSpace

Session 5: Infrastructure for Sensitive Data

INCF

This course consists of a three-part session from the second day of INCF's Neuroinformatics Assembly 2023. The lessons describe various on-going efforts within the fields of neuroinformatics and clinical neuroscience to adjust to the increasingly vast volumes of brain data being collected and stored.

 

INCF Assembly 2022 - Day 3 Sessions

INCF

Sessions from the INCF Neuroinformatics Assembly 2022 Day 3. 

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INCF TrainingSpace

Session 6: Research Workflows for Collaborative Neuroscience

INCF

This course contains videos, lectures, and hands-on tutorials as part of INCF's Neuroinformatics Assembly 2023 workshop on developing robust and reproducible research workflows to foster greater collaborative efforts in neuroscience.

 
INCF TrainingSpace

Session 4: "Is This FAIR?": Transparency in EDI, Career Development, & Management

INCF

There is a growing recognition and adoption of open and FAIR science practices in neuroscience research. This is predominately regarded as scientific progress and has enabled significant opportunities for large, collaborative, team science. The efforts and practical work that go into creating an open and FAIR landscape extend far beyond just the science.

 
INCF TrainingSpace

Deep Learning: Optimization

NYU Center for Data Science

This module covers the concepts of gradient descent, stochastic gradient descent, and momentum. It is a part of the Deep Learning Course at NYU's Center for Data Science, a course that covered the latest techniques in deep learning and representation learning, focusing on supervised and unsupervised deep learning, embedding methods, metric learning, convolutional and recurrent nets, with applications to computer vision, natural language understanding, and speech recognition. Pr

 

FAIR neuroscience and EBRAINS tools for data sharing, analysis, and simulation

INCF

This workshop provides an opportunity to explore the advanced tools and techniques for data sharing, analysis, visualization, and simulation.

 

High-Performance Computing (HPC)

The dimensionality and size of datasets in many fields of neuroscience research require massively parallel computing power.  Fortunately, the maturity and accessibility of virtualization technologies has made it feasible to run the same analysis environments on platforms ranging from single laptop computers up to high-performance computing networks.

 
INCF TrainingSpace

Session 8: FAIR Data: The Role of Journals

INCF

Most neuroscience journals request authors to make their data publicly available in appropriate repositories. The requirements and policies put forward by journals vary, and the services provided for different types of data also differ considerably across repositories.

 

Introduction to Neurodata Without Borders (NWB) for Python Users I

NWB Core Development Team

The Neurodata Without Borders: Neurophysiology project (NWB, https://www.nwb.org/) is an effort to standardize the description and storage of neurophysiology data and metadata. NWB enables data sharing and reuse and reduces the energy-barrier to applying data analytics both within and across labs. Several laboratories, including the Allen Institute for Brain Science, have wholeheartedly adopted NWB.

 
INCF TrainingSpace

Standards and Best Practices

INCF

Standards and best practices make neuroscience a data-centric discipline and are key for integrating diverse data and for developing a robust, effective, and sustainable infrastructure to support open and reproducible neuroscience. This study track provides an introduction to standards and best practices that support the FAIR Principles.

 

Introduction to Neurobiology for Non-Specialists

HBP Education Programme

The field of neuroscience is one of the most interdisciplinary scientific fields. It is constantly expanded and developed further and unites researchers from a vast variety of backgrounds such as chemistry, biology, physics, medicine, or psychology. By examining the principles that influence the development and function of the human nervous system, it advances the understanding of the fundamental mechanisms of human behaviour, emotions, and thoughts, and what happens if they fail.

 

FAIR neuroscience and EBRAINS tools for data sharing, analysis, and simulation

INCF

This workshop provides an opportunity to explore the advanced tools and techniques for data sharing, analysis, visualization, and simulation.

 

INCF Assembly 2022 - Day 1 Sessions

INCF

Sessions from the INCF Neuroinformatics Assembly 2022 day 1. 

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INCF Assembly 2022 - Training Day 1

INCF

This course contains sessions from the first day of INCF's Neuroinformatics Assembly 2022.

 
INCF TrainingSpace

Preprocessing Data in EEGLAB

Swartz Center for Computational Neuroscience

EEGLAB is an interactive MATLAB toolbox for processing continuous and event-related EEG, MEG, and other electrophysiological data incorporating independent component analysis (ICA), time/frequency analysis, artifact rejection, event-related statistics, and several useful modes of visualization of the averaged and single-trial data.

 

INCF Assembly 2022 - Day 3 Sessions

INCF

Sessions from the INCF Neuroinformatics Assembly 2022 Day 3. 

VIEW THE PROGRAM