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This lesson consists of lecture and tutorial components, focusing on resources and tools which facilitate multi-scale brain modeling and simulation. 

Difficulty level: Beginner
Duration: 3:46:21

In this talk, challenges of handling complex neuroscientific data are discussed, as well as tools and services for the annotation, organization, storage, and sharing of these data. 

Difficulty level: Beginner
Duration: 21:49
Speaker: : Thomas Wachtler

This lecture describes the neuroscience data respository G-Node Infrastructure (GIN), which provides platform independent data access and enables easy data publishing. 

Difficulty level: Beginner
Duration: 22:23
Speaker: : Michael Sonntag

This lesson provides an introduction to the course Neuroscience Data Integration Through Use of Digital Brain Atlases, during which attendees will learn about concepts for integration of research data, approaches and resources for assigning anatomical location to brain data, and infrastructure for sharing experimental brain research data. 

Difficulty level: Beginner
Duration: 14:02
Speaker: : Trygve Leergard

This talk covers the various concepts, motivations, and trends within the neuroscientific community related to the sharing and integration of brain research data. 

Difficulty level: Beginner
Duration: 30:39
Speaker: : Jan G. Bjaalie

This lesson focuses on the neuroanatomy of the human brain, delving into macrostructures like cortices, lobes, and hemispheres, and microstructures like neurons and cortical laminae.

Difficulty level: Beginner
Duration: 51:30

This lesson provides an introduction to the European open research infrastructure EBRAINS and its digital brain atlas resources.

Difficulty level: Beginner
Duration: 27:45
Speaker: : Trygve Leergard

In this lesson, attendees will learn about the challenges in assigning experimental brain data to specific locations, as well as the advantages and shortcomings of current location assignment procedures. 

Difficulty level: Beginner
Duration: 32:18

This lesson covers the inherent difficulties associated with integrating neuroscientific data, as well as the current methods and approaches to do so. 

Difficulty level: Beginner
Duration: 25:41
Speaker: : Trygve Leergard

Attendees of this talk will learn about QuickNII, a tool for user-guided affine registration of 2D experimental image data to 3D atlas reference spaces, which also facilitates data integration through standardized coordinate systems. 

Difficulty level: Beginner
Duration: 21:08
Speaker: : Maja Puchades

This lesson provides an overview of DeepSlice, a Python package which aligns histology to the Allen Brain Atlas and Waxholm Rat Atlas using deep learning.

Difficulty level: Beginner
Duration: 17:30
Speaker: : Harry Carey

This lesson provides an overview of the current status in the field of neuroscientific ontologies, presenting examples of data organization and standards, particularly from neuroimaging and electrophysiology. 

Difficulty level: Intermediate
Duration: 33:41

This lecture contains an overview of the Distributed Archives for Neurophysiology Data Integration (DANDI) archive, its ties to FAIR and open-source, integrations with other programs, and upcoming features.

Difficulty level: Beginner
Duration: 13:34
Course:

This session will include presentations of infrastructure that embrace the FAIR principles developed by members of the INCF Community.

 

This lecture provides an overview of The Virtual Brain Simulation Platform.

 

Difficulty level: Beginner
Duration: 9:36
Speaker: : Petra Ritter

This lesson contains both a lecture and a tutorial component. The lecture (0:00-20:03 of YouTube video) discusses both the need for intersectional approaches in healthcare as well as the impact of neglecting intersectionality in patient populations. The lecture is followed by a practical tutorial in both Python and R on how to assess intersectional bias in datasets. Links to relevant code and data are found below. 

Difficulty level: Beginner
Duration: 52:26

In this lesson, you will learn in more detail about neuromorphic computing, that is, non-standard computational architectures that mimic some aspect of the way the brain works. 

Difficulty level: Intermediate
Duration: 10:08
Speaker: : Dan Goodman

This lecture explains the need for data federation in medicine and how it can be achieved.

Difficulty level: Intermediate
Duration: 27:09
Speaker: : Philippe Ryvlin

Following the previous lesson on neuronal structure, this lesson discusses neuronal function, particularly focusing on spike triggering and propogation. 

Difficulty level: Intermediate
Duration: 6:58
Speaker: : Marcus Ghosh

This lesson introduces the practical exercises which accompany the previous lessons on animal and human connectomes in the brain and nervous system. 

Difficulty level: Intermediate
Duration: 4:10
Speaker: : Dan Goodman

This lesson discusses a gripping neuroscientific question: why have neurons developed the discrete action potential, or spike, as a principle method of communication? 

Difficulty level: Intermediate
Duration: 9:34
Speaker: : Dan Goodman