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Manipulate the default connectome provided with TVB to see how structural lesions effect brain dynamics. In this hands-on session you will insert lesions into the connectome within the TVB graphical user interface (GUI). Afterwards, the modified connectome will be used for simulations and the resulting activity will be analysed using functional connectivity.

Difficulty level: Beginner
Duration: 31:22
Speaker: : Paul Triebkorn

This presentation discusses the impact of data sharing in stroke.

Difficulty level: Intermediate
Duration: 16:33
Speaker: : Valeria Caso

This talks presents an overview of the potential for data federation in stroke research.

Difficulty level: Intermediate
Duration: 21:37
Course:

This talk focuses on the EAN Scientific Panel of Stroke, in particular on the aims and roles of the panel.

Difficulty level: Intermediate
Duration: 18:19
Speaker: : Anna Bersano

This lesson provides an overview of the current status in the field of neuroscientific ontologies, presenting examples of data organization and standards, particularly from neuroimaging and electrophysiology. 

Difficulty level: Intermediate
Duration: 33:41

This lecture covers the NIDM data format within BIDS to make your datasets more searchable, and how to optimize your dataset searches.

Difficulty level: Beginner
Duration: 12:33
Speaker: : David Keator

This lecture covers positron emission tomography (PET) imaging and the Brain Imaging Data Structure (BIDS), and how they work together within the PET-BIDS standard to make neuroscience more open and FAIR.

Difficulty level: Beginner
Duration: 12:06
Speaker: : Melanie Ganz

This lecture discusses how to standardize electrophysiology data organization to move towards being more FAIR.

Difficulty level: Beginner
Duration: 15:51

Hierarchical Event Descriptors (HED) fill a major gap in the neuroinformatics standards toolkit, namely the specification of the nature(s) of events and time-limited conditions recorded as having occurred during time series recordings (EEG, MEG, iEEG, fMRI, etc.). Here, the HED Working Group presents an online INCF workshop on the need for, structure of, tools for, and use of HED annotation to prepare neuroimaging time series data for storing, sharing, and advanced analysis. 

     

    Difficulty level: Beginner
    Duration: 03:37:42
    Speaker: :

    In this lesson, attendees will learn about the data structure standards, specifically the Brain Imaging Data Structure (BIDS), an INCF-endorsed standard for organizing, annotating, and describing data collected during neuroimaging experiments. 

    Difficulty level: Beginner
    Duration: 21:56
    Speaker: : Michael Schirner

    This is a continuation of the talk on the cellular mechanisms of neuronal communication, this time at the level of brain microcircuits and associated global signals like those measureable by electroencephalography (EEG). This lecture also discusses EEG biomarkers in mental health disorders, and how those cortical signatures may be simulated digitally.

    Difficulty level: Intermediate
    Duration: 1:11:04
    Speaker: : Etay Hay

    This tutorial demonstrates how to work with neuronal data using MATLAB, including actional potentials and spike counts, orientation tuing curves in visual cortex, and spatial maps of firing rates.

    Difficulty level: Intermediate
    Duration: 5:17
    Speaker: : Mike X. Cohen

    This lesson instructs users on how to import electrophysiological neural data into MATLAB, as well as how to convert spikes to a data matrix.

    Difficulty level: Intermediate
    Duration: 11:37
    Speaker: : Mike X. Cohen

    In this lesson, users will learn how to appropriately sort and bin neural spikes, allowing for the generation of a common and powerful visualization tool in neuroscience, the histogram. 

    Difficulty level: Intermediate
    Duration: 5:31
    Speaker: : Mike X. Cohen

    Followers of this lesson will learn how to compute, visualize and quantify the tuning curves of individual neurons. 

    Difficulty level: Intermediate
    Duration: 13:48
    Speaker: : Mike X. Cohen

    This lesson demonstrates how to programmatically generate a spatial map of neuronal spike counts using MATLAB.

    Difficulty level: Intermediate
    Duration: 12:16
    Speaker: : Mike X. Cohen

    In this lesson, users are shown how to create a spatial map of neuronal orientation tuning. 

    Difficulty level: Intermediate
    Duration: 13:11
    Speaker: : Mike X. Cohen

    This lecture provides an introduction to Plato’s concept of rationality and Aristotle’s concept of empiricism, and the enduring discussion between rationalism and empiricism to this day.

    Difficulty level: Beginner
    Duration: 1:13:45

    This lecture goes into further detail about the hard problem of developing a scientific discipline for subjective consciousness.

    Difficulty level: Beginner
    Duration: 58:03

    This video gives a brief introduction to the second session of talks from INCF's Neuroinformatics Assembly 2023. 

    Difficulty level: Beginner
    Duration: 3:55
    Speaker: : Trygve Leergard