Neuromatch Academy aims to introduce traditional and emerging tools of computational neuroscience to trainees.

This module covers the concept of associative memories in deep learning. It is a part of the Deep Learning Course at NYU's Center for Data Science. Prerequisites for this module include: Introduction to Deep Learning (module 1 of the course), Parameter Sharing (module 2 of the course), 

Neurohackademy is a two-week hands-on summer institute in neuroimaging and data science held at the University of Washington eScience Institute. Participants learn about technologies used to analyze human neuroscience data, and to make analyses and results shareable and reproducible.

The emergence of data-intensive science creates a demand for neuroscience educators worldwide to deliver better neuroinformatics education and training in order to raise a generation of modern neuroscientists with FAIR capabilities, awareness of the value of standards and best practices, knowledge in dealing with big datasets, and the ability to integrate knowledge over multiple scales and methods.

This workshop provides an opportunity to explore the advanced tools and techniques for data sharing, analysis, visualization, and simulation.

These courses give introductions and overviews of some of the major statistics software packages currently used in neuroscience research.

The dimensionality and size of datasets in many fields of neuroscience research require massively parallel computing power.  Fortunately, the maturity and accessibility of virtualization technologies has made it feasible to run the same analysis environments on platforms ranging from single laptop computers up to high-performance computing networks.

This workshop provides an opportunity to explore the advanced tools and techniques for data sharing, analysis, visualization, and simulation.

This course contains sessions from the second day of INCF's Neuroinformatics Assembly 2022.

This course consists of three lessons, each corresponding to a lightning talk given at the first day of INCF's Neuroinformatics Assembly 2023. By following along these brief talks, you will hear about topics such as open source tools for computer vision, tools for the integration of various MRI dataset formats, as well as international data governance. 

Much like neuroinformatics, data science uses techniques from computational science to derive meaningful results from large complex datasets. In this session, we will explore the relationship between neuroinformatics and data science, by emphasizing a range of data science approaches and activities, ranging from the development and application of statistical methods, through the establishment of communities and platforms, and through the implementation of open-source software tools.

Bayesian inference (using prior knowledge to generate more accurate predictions about future events or outcomes) has become increasingly applied to the fields of neuroscience and neuroinformatics. In this course, participants are taught how Bayesian statistics may be used to build cognitive models of processes like learning or perception. This course also offers theoretical and practical instruction on dynamic causal modeling as applied to fMRI and EEG data.

This course begins with the conceptual basics of machine learning and then moves on to some Python-based applications of popular supervised learning algorithms to neuroscience data. This is followed by a series of lectures that explore the history and applications of deep learning, ending with a presentation on the potential of deep learning for neuroscience applications/mis-applications.

In this course, you will learn about working with calcium-imaging data, including image processing to remove background "blur", identifying cells based on threshold spatial contiguity, time-series filtering, and principal component analysis (PCA). The MATLAB code shows data animations, capabilities of the image processing toolbox, and PCA.

This course offers lectures on the origin and functional significance of certain electrophysiological signals in the brain, as well as a hands-on tutorial on how to simulate, statistically evaluate, and visualize such signals. Participants will learn the simulation of signals at different spatial scales, including single-cell (neuronal spiking) and global (EEG), and how these may serve as biomarkers in the evaluation of mental health data.

This course consists of three lessons, each corresponding to a lightning talk given at the first day of INCF's Neuroinformatics Assembly 2023. By following along these brief talks, you will hear about topics such as open source tools for computer vision, tools for the integration of various MRI dataset formats, as well as international data governance. 

This course contains sessions from the first day of INCF's Neuroinformatics Assembly 2022.

Difficulties experienced in understanding machine learning techniques often stem from lack of clarity concerning more basic statistical models and fundamental considerations, including the various regression models that can all be subsumed under the General Linear Model.

In this course, you will learn about working with calcium-imaging data, including image processing to remove background "blur", identifying cells based on threshold spatial contiguity, time-series filtering, and principal component analysis (PCA). The MATLAB code shows data animations, capabilities of the image processing toolbox, and PCA.

This course contains sessions from the first day of INCF's Neuroinformatics Assembly 2022.