The Mouse Phenome Database (MPD) provides access to primary experimental trait data, genotypic variation, protocols and analysis tools for mouse genetic studies. Data are contributed by investigators worldwide and represent a broad scope of phenotyping endpoints and disease-related traits in naïve mice and those exposed to drugs, environmental agents or other treatments. MPD ensures rigorous curation of phenotype data and supporting documentation using relevant ontologies and controlled vocabularies. As a repository of curated and integrated data, MPD provides a means to access/re-use baseline data, as well as allows users to identify sensitized backgrounds for making new mouse models with genome editing technologies, analyze trait co-inheritance, benchmark assays in their own laboratories, and many other research applications. MPD’s primary source of funding is NIDA. For this reason, a majority of MPD data is neuro- and behavior-related.

This lesson gives an introduction to the Mathematics chapter of Datalabcc's Foundations in Data Science series.

This lesson serves a primer on elementary algebra.

This lesson provides a primer on linear algebra, aiming to demonstrate how such operations are fundamental to many data science. 

In this lesson, users will learn about linear equation systems, as well as follow along some practical use cases.

This talk gives a primer on calculus, emphasizing its role in data science.

This lesson clarifies how calculus relates to optimization in a data science context. 

This lesson covers Big O notation, a mathematical notation that describes the limiting behavior of a function as it tends towards a certain value or infinity, proving useful for data scientists who want to evaluate their algorithms' efficiency.

This lesson serves as a primer on the fundamental concepts underlying probability. 

Serving as good refresher, this lesson explains the maths and logic concepts that are important for programmers to understand, including sets, propositional logic, conditional statements, and more.

This compilation is courtesy of freeCodeCamp.

This lesson provides a useful refresher which will facilitate the use of Matlab, Octave, and various matrix-manipulation and machine-learning software.

This lesson was created by RootMath.

This short talk addresses how to use VisuAlign to make nonlinear adjustments to 2D-to-3D registrations generated by QuickNII. 

This talk aims to provide guidance regarding the myriad labelling methods for histological image data. 

This lesson provides a cross-species comparison of neuron types in the rat and mouse brain. 

This lecture concludes the course with an outline of future directions of the field of neuroscientific research data integration. 

This is a hands-on tutorial on PLINK, the open source whole genome association analysis toolset. The aims of this tutorial are to teach users how to perform basic quality control on genetic datasets, as well as to identify and understand GWAS summary statistics. 

This lesson is an overview of transcriptomics, from fundamental concepts of the central dogma and RNA sequencing at the single-cell level, to how genetic expression underlies diversity in cell phenotypes. 

In this lesson, you will learn about data management within the Open Data Commons (ODC) framework, and in particular, how Spinal Cord Injury (SCI) data is stored, shared, and published. You will also hear about Frictionless Data, an open-source toolkit aimed at simplifying the data experience. 

This talk describes the NIH-funded SPARC Data Structure, and how this project navigates ontology development while keeping in mind the FAIR science principles. 

This talk goes over Neurobagel, an open-source platform developed for improved dataset sharing and searching.