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Manipulate the default connectome provided with TVB to see how structural lesions effect brain dynamics. In this hands-on session you will insert lesions into the connectome within the TVB graphical user interface (GUI). Afterwards, the modified connectome will be used for simulations and the resulting activity will be analysed using functional connectivity.

Difficulty level: Beginner
Duration: 31:22
Speaker: : Paul Triebkorn

This presentation discusses the impact of data sharing in stroke.

Difficulty level: Intermediate
Duration: 16:33
Speaker: : Valeria Caso

This talks presents an overview of the potential for data federation in stroke research.

Difficulty level: Intermediate
Duration: 21:37
Course:

This talk focuses on the EAN Scientific Panel of Stroke, in particular on the aims and roles of the panel.

Difficulty level: Intermediate
Duration: 18:19
Speaker: : Anna Bersano

This is a tutorial on how to simulate neuronal spiking in brain microcircuit models, as well as how to analyze, plot, and visualize the corresponding data. 

Difficulty level: Intermediate
Duration: 1:39:50
Speaker: : Frank Mazza

This video will document the process of running an app on brainlife, from data staging to archiving of the final data outputs.

Difficulty level: Beginner
Duration: 3:43
Speaker: :

This quick video presents some of the various visualizers available on brainlife.io

Difficulty level: Beginner
Duration: 1:11
Speaker: :

This short video shows how a brainlife.io publication can be opened from the Data Deposition page of the journal Nature Scientific Data.

Difficulty level: Beginner
Duration: 2:25
Speaker: :
Course:

An introduction to data management, manipulation, visualization, and analysis for neuroscience. Students will learn scientific programming in Python, and use this to work with example data from areas such as cognitive-behavioral research, single-cell recording, EEG, and structural and functional MRI. Basic signal processing techniques including filtering are covered. The course includes a Jupyter Notebook and video tutorials.

 

Difficulty level: Beginner
Duration: 1:09:16
Speaker: : Aaron J. Newman

This lesson provides an overview of the current status in the field of neuroscientific ontologies, presenting examples of data organization and standards, particularly from neuroimaging and electrophysiology. 

Difficulty level: Intermediate
Duration: 33:41

Following the previous lesson on neuronal structure, this lesson discusses neuronal function, particularly focusing on spike triggering and propogation. 

Difficulty level: Intermediate
Duration: 6:58
Speaker: : Marcus Ghosh

This lesson introduces the practical exercises which accompany the previous lessons on animal and human connectomes in the brain and nervous system. 

Difficulty level: Intermediate
Duration: 4:10
Speaker: : Dan Goodman

This lesson discusses a gripping neuroscientific question: why have neurons developed the discrete action potential, or spike, as a principle method of communication? 

Difficulty level: Intermediate
Duration: 9:34
Speaker: : Dan Goodman

This lesson provides an introduction to the myriad forms of cellular mechanisms whicn underpin healthy brain function and communication. 

Difficulty level: Beginner
Duration: 12:20
Speaker: : Carl Petersen

This lesson provides an introduction to the course Cellular Mechanisms of Brain Function.

Difficulty level: Beginner
Duration: 12:20
Speaker: : Carl Petersen

In this lesson you will learn about ion channels and the movement of ions across the cell membrane, one of the key mechanisms underlying neuronal communication. 

Difficulty level: Beginner
Duration: 25:51
Speaker: : Carl Petersen

This lesson presents the typical setup, equipment, and solutions used in whole-cell recording of neurons. 

Difficulty level: Beginner
Duration: 09:13
Speaker: : Carl Petersen

This lesson provides an introductory overview to synaptic transmission and associated neurotransmitters. 

Difficulty level: Beginner
Duration: 28:22
Speaker: : Carl Petersen

This lecture covers NeuronUnit, a library that builds upon SciUnit and integrates with several existing neuroinformatics resources to support validating single-neuron models using data gathered by neurophysiologists.

Difficulty level: Intermediate
Duration: 17:21
Speaker: : Richard Gerkin

This lesson provides an introduction to the NeuroElectro project, which aims to organize information on cellular neurophysiology.

Difficulty level: Intermediate
Duration: 17:41