This lecture goes into detailed description of how to process workflows in the virtual research environment (VRE), including approaches for standardization, metadata, containerization, and constructing and maintaining scientific pipelines. 

This lesson gives a quick introduction to the rest of this course, Research Workflows for Collaborative Neuroscience. 

This lesson provides an overview of how to conceptualize, design, implement, and maintain neuroscientific pipelines in via the cloud-based computational reproducibility platform Code Ocean. 

This lesson provides an overview of how to construct computational pipelines for neurophysiological data using DataJoint.

This talk describes approaches to maintaining integrated workflows and data management schema, taking advantage of the many open source, collaborative platforms already existing.

This lesson is the first of three hands-on tutorials as part of the workshop Research Workflows for Collaborative Neuroscience. This tutorial goes over how to visualize data with Scanpy, a scalable toolkit for analyzing single-cell gene expression. 

This hands-on tutorial walks you through DataJoint platform, highlighting features and schema which can be used to build robost neuroscientific pipelines. 

In this third and final hands-on tutorial from the Research Workflows for Collaborative Neuroscience workshop, you will learn about workflow orchestration using open source tools like DataJoint and Flyte. 

This lesson consists of a panel discussion, wrapping up the INCF Neuroinformatics Assembly 2023 workshop Research Workflows for Collaborative Neuroscience. 

Video coming soon. 

This lecture provides a detailed description of how to incorporate HED annotation into your neuroimaging data pipeline. 

This lesson gives an in-depth description of scientific workflows, from study inception and planning to dissemination of results. 

This lecture describes how to build research workflows, including a demonstrate using DataJoint Elements to build data pipelines.

This lesson gives an introductory presentation on how data science can help with scientific reproducibility.

This lecture discusses how FAIR practices affect personalized data models, including workflows, challenges, and how to improve these practices.

This lecture covers how to make modeling workflows FAIR by working through a practical example, dissecting the steps within the workflow, and detailing the tools and resources used at each step.

This lesson describes the principles underlying functional magnetic resonance imaging (fMRI), diffusion-weighted imaging (DWI), tractography, and parcellation. These tools and concepts are explained in a broader context of neural connectivity and mental health. 

This tutorial introduces pipelines and methods to compute brain connectomes from fMRI data. With corresponding code and repositories, participants can follow along and learn how to programmatically preprocess, curate, and analyze functional and structural brain data to produce connectivity matrices. 

In this lesson, you will learn about the connectome, the collective system of neural pathways in an organism, with a closer look at the neurons, synapses, and connections of particular species. 

This lesson delves into the human nervous system and the immense cellular, connectomic, and functional sophistication therein.