In this course we present the TVB-EBRAINS integrated workflows that have been developed in the Human Brain Project in the third funding phase (“SGA2”) in the Co-Design Project 8 “The Virtual Brain”.
The Virtual Brain (TVB) on EBRAINS
Course Features
TVB integrated workflows on EBRAINS
Integrated workflows: Image processing pipeline
TVB in the Human Brain Project cloud
The Bayesian virtual epileptic patient
TVB to NEST multi-scale simulation
TVB-NEST-Elephant workflow
Automatic TVB model generation workflow
Lessons of this Course
1
1
Duration:
0:32:21
Speaker:
An overview of The Virtual Brain integrated workflows on EBRAINS.
2
2
Duration:
0:24:31
Speaker:
Walk through of the Image Processing Pipeline, an integral part of the TVB on EBRAINS integrated workflows.
3
3
Duration:
0:24:55
Speaker:
An overview of The Virtual Brain simulator and it's integration into the Human Brain Project Cloud and EBRAINS infrastructure.
4
4
Duration:
0:08:38
Speaker:
An overview of the EBRAINS integrated Fast TVB, a C implementation of TVB that is orders of magnitude faster than the original Python TVB, and capable of performing parallelizable simulations in the cloud.
5
5
Duration:
0:15:39
Speaker:
An overview of the Bayesian Virtual Epileptic Patient (BVEP), a research use case using TVB supported on the EBRAINS infrastructure.
6
6
Duration:
0:25:14
Speaker:
An overview of the process of developing the TVB-NEST co-simulation on the EBRAINS infrastructure, and it's use cases.
7
7
Duration:
0:06:05
Speaker:
An overview of the multi-scale co-simulation between TVB-NEST and Elephant on the EBRAINS infrastructure.
8
8
Duration:
0:23:11
An overview of the process of constructing models for TVB automatically on the EBRAINS infrastructure.
