This lesson gives an introduction to high-performance computing with the Compute Canada network, first providing an overview of use cases for HPC and then a hands-on tutorial. Though some examples might seem specific to the Calcul Québec, all computing clusters in the Compute Canada network share the same software modules and environments.

This talk presents an overview of CBRAIN, a web-based platform that allows neuroscientists to perform computationally intensive data analyses by connecting them to high-performance computing facilities across Canada and around the world.

In this module you will learn the basics of Brain Computer Interface (BCI). You will read an introduction to the different technologies available, the main components and steps required for BCI, associated safety and ethical issues, as well as an overview about the future of the field.

In this module, users will learn about the different types of neurotechnology and how each of them works. This will be done through the metaphor of going to a symphony... in your brain. Like a symphony, brain processes emerge from collections of neural activity. This video encourages us to imagine ourselves moving to different areas in the concert hall to understand where different technologies interface. Once the concert ends, we talk about underlying neural mechanisms and technology that allow researchers and innovators to interact with the brain.

This module addresses how neurotechnology is currently used for medical and non-medical applications, and how it might advance in the future.

This module covers a brief history of the neurotechnology industry, bringing the history of brain-computer interfacing to life through engaging skits and stories. 

This module covers many types of invasive neurotechnology devices/interfaces for the central and peripheral nervous systems. Invasive neurotech devices are crucial, as they often provide the greatest accuracy and long-term use applicability.

This module covers many of the types of non-invasive neurotech and neuroimaging devices including electroencephalography (EEG), electromyography (EMG), electroneurography (ENG), magnetoencephalography (MEG), and more. 

Neuromodulation refers to devices that influence the firing of neurons which can be useful in many medical applications. This modules covers what neuromodulation is, how it affects the functioning of neurons, and the many forms that these devices take on.

This modules covers neuroprosthetic and cognitive enhancement devices that can help augment our capabilities by enhancing memory, as well as restoring or improving our senses. 

This module goes over the methods that neurotechnologists use to turn brain data into commands a computer or a machine can understand. We cover data collection, processing, filtering, analysis, how to generate an action in a device, asynchronous BCIs that use population encoding, and synchronous BCIs that use P300, SSVEP, N100, and N400 signals. 

This module covers the many things that brain-computer interfaces can and will be able to do, including motor neuroprosthetics like prosthetic arms, exosuits, and vehicle control, as well as computer and machine interfacing use-cases.

This module covers how neurotechnology is perceived in media today. We discuss a few specific films and talk about how the perception of neurotechnology changes with our media. Finally, we introduce a few interesting terms related to ethics and address some future issues the technology may cause.

What will happen to the mind and our personalities when we start modifying our brains and bodies with technology? What is the mind and how should we think about it? What is a cyborg and what makes them human? Where is the line between these? This video invites us to think about what the future of consciousness might look like. 

An introduction to data management, manipulation, visualization, and analysis for neuroscience. Students will learn scientific programming in Python, and use this to work with example data from areas such as cognitive-behavioral research, single-cell recording, EEG, and structural and functional MRI. Basic signal processing techniques including filtering are covered. The course includes a Jupyter Notebook and video tutorials.

This lesson introduces the practical exercises which accompany the previous lessons on animal and human connectomes in the brain and nervous system. 

This tutorial introduces pipelines and methods to compute brain connectomes from fMRI data. With corresponding code and repositories, participants can follow along and learn how to programmatically preprocess, curate, and analyze functional and structural brain data to produce connectivity matrices. 

This video demonstrates each required step for preprocessing T1w anatomical data in brainlife.io.

The Allen Mouse Brain Atlas is a genome-wide, high-resolution atlas of gene expression throughout the adult mouse brain. This tutorial describes the basic search and navigation features of the Allen Mouse Brain Atlas.

The Allen Developing Mouse Brain Atlas is a detailed atlas of gene expression across mouse brain development. This tutorial describes the basic search and navigation features of the Allen Developing Mouse Brain Atlas.