In this workshop talk, you will receive a tour of the Code Ocean ScienceOps Platform, a centralized cloud workspace for all teams.
This talk describes approaches to maintaining integrated workflows and data management schema, taking advantage of the many open source, collaborative platforms already existing.
This lesson consists of a panel discussion, wrapping up the INCF Neuroinformatics Assembly 2023 workshop Research Workflows for Collaborative Neuroscience.
This lesson provides an introduction to the DataLad, a free and open source distributed data management system that keeps track of your data, creates structure, ensures reproducibility, supports collaboration, and integrates with widely used data infrastructure.
This lesson introduces several open science tools like Docker and Apptainer which can be used to develop portable and reproducible software environments.
In this hands-on session, you will learn how to explore and work with DataLad datasets, containers, and structures using Jupyter notebooks.
This talk describes the challenges in sharing personal, and in particular, health data, such as data anonymization and maintaining GDPR compliance.
In this short talk you will learn about The Neural System Laboratory, which aims to develop and implement new technologies for analysis of brain architecture, connectivity, and brain-wide gene and molecular level organization.
This lecture provides a detailed description of how to incorporate HED annotation into your neuroimaging data pipeline.
This lesson aims to define computational neuroscience in general terms, while providing specific examples of highly successful computational neuroscience projects.
In this lesson, you will learn how to understand data management plans and why data sharing is important.
This quick visual walkthrough presents the steps required in uploading data into a brainlife project using the graphical user interface (GUI).
This video will document the process of uploading data into a brainlife project using ezBIDS.
This short video walks you through the steps of publishing a dataset on brainlife, an open-source, free and secure reproducible neuroscience analysis platform.
This video will document the process of visualizing the provenance of each step performed to generate a data object on brainlife.
This video will document the process of downloading and running the "reproduce.sh" script, which will automatically run all of the steps to generate a data object locally on a user's machine.
This lesson describes and shows four different ways one may upload their data to brainlife.io.
This video will demonstrate how to create and launch a pipeline using FreeSurfer on brainlife.io.
This short video shows how a brainlife.io publication can be opened from the Data Deposition page of the journal Nature Scientific Data.
This video will document the process of importing a dataset archived on OpenNeuro from the Datasets tab into a brainlife project.