Optical Physiology in PyNWB

Optical Physiology in PyNWB

By
NWB Core Development Team
Difficulty level
Intermediate
Speaker
Ryan Ly
Type
Jupyter Notebook
Lectures
Video
Duration
31:04
Topic
Electrophysiology
Standards and best practices

Learn how to create a standard calcium imaging dataset in NWB using Python.

Topics covered in this lesson
  • 2p images
  • ROI segmentation
  • Acquisition system
  • Subject metadata
  • Position tracking
External Links
Jupyter notebook
NWB
Prerequisites

What is NWB, with short intro to NWB-enabled tools

Technology requirement

Python, PyNWB

 

Related lessons

Back to the course
Introduction to Neurodata Without Borders (NWB) for Python Users I