Optical physiology in PyNWB

Optical physiology in PyNWB

By
NWB Core Development Team
Difficulty level
Intermediate
Speaker
Ryan Ly
Type
Jupyter Notebook
Lectures
Video
Duration
31:04
Topic
Electrophysiology
Standards and best practices

Learn how to create a standard calcium imaging dataset in NWB using Python

Topics covered in this lesson
  • 2p images
  • ROI segmentation
  • Acquisition system
  • Subject metadata
  • Trails
  • Position tracking
External Links
Link to Jupyter notebook
Link to NWB website
Prerequisites

What is NWB, with short intro to NWB-enabled tools

Technology requirement

Python, PyNWB

 

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