Cell Extraction From Video Data
Cell Extraction From Video Data
This lesson will go through how to extract cells from video that has been cleaned of background noise and motion.
Topics covered in this lesson
- Pre-processing and motion correction
- Compute a max projection
- Parameters
- Threshold of this peak to noise ratio
- Over merging
- Spatial matrix initialization
- Initial spatial footprint
- General visualization of the result
- Visualization of the dropped cells
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