Course designed for advanced learners interested in understanding the foundations of Machine Learning in Python.
General: The course consists of 15 lectures (ca. 1-2 hours each) and 15 exercise sheets (for ca. 6 hours of programming each).
Institution: High-Performance Computing and Analytics Lab, University of Bonn
Neuromatch Academy aims to introduce traditional and emerging tools of computational neuroscience to trainees.
This course includes both lectures and tutorials around the management and analysis of genomic data in clinical research and care. Participants are led through the basics of genome-wide association studies (GWAS), genotypes, and polygenic risk scores, as well as novel concepts and tools for more sophisticated consideration of population stratification in GWAS.
The emergence of data-intensive science creates a demand for neuroscience educators worldwide to deliver better neuroinformatics education and training in order to raise a generation of modern neuroscientists with FAIR capabilities, awareness of the value of standards and best practices, knowledge in dealing with big datasets, and the ability to integrate knowledge over multiple scales and methods.
This course provides several visual walkthroughs documenting how to execute various processes in brainlife.io, an open-source, free and secure reproducible neuroscience analysis platform. The platform allows to analyze Magnetic Resonance Imaging (MRI), electroencephalography (EEG) and magnetoencephalography (MEG) data. Data can either be uploaded from local computers or imported from public archives such as OpenNeuro.org.
This workshop provides an opportunity to explore the advanced tools and techniques for data sharing, analysis, visualization, and simulation.
This course contains sessions from the second day of INCF's Neuroinformatics Assembly 2022.
Much like neuroinformatics, data science uses techniques from computational science to derive meaningful results from large complex datasets. In this session, we will explore the relationship between neuroinformatics and data science, by emphasizing a range of data science approaches and activities, ranging from the development and application of statistical methods, through the establishment of communities and platforms, and through the implementation of open-source software tools.
This lecture series is presented by NeuroTechEU, an alliance between eight European universities with the goal to build a trans-European network of excellence in brain research and technologies. By following along with this series, participants will learn about the history of cognitive science and the development of the field in a sociocultural context, as well as its trajectory into the future with the advent of artificial intelligence and neural network development.
This course is intended for those interested in electroencephalography (EEG) and event-related potentials (ERPs) techniques, and those interested in collecting, annotating, standardizing, storing, processing, sharing, and publishing data from electrical activity of the human brain.
This course consists of a three-part session from the second day of INCF's Neuroinformatics Assembly 2023. The lessons describe various on-going efforts within the fields of neuroinformatics and clinical neuroscience to adjust to the increasingly vast volumes of brain data being collected and stored.
These lessons give an overview of the principles underpinning the objectives, policies, and practice of Open Science, including several representative policy documents that will be increasingly relevant to neuroscience research.
There is a broad consensus among researchers, publishers, and funding bodies that open sharing of data is needed to address major reproducibility and transparency challenges that currently exist in all scientific disciplines. In addition to potentially increasing the utilization of shared data through re-analysis and integration with other data, data sharing is beneficial for individual researchers through data citation and increased exposure of research.
This course offers lectures on the origin and functional significance of certain electrophysiological signals in the brain, as well as a hands-on tutorial on how to simulate, statistically evaluate, and visualize such signals. Participants will learn the simulation of signals at different spatial scales, including single-cell (neuronal spiking) and global (EEG), and how these may serve as biomarkers in the evaluation of mental health data.
Sessions from the INCF Neuroinformatics Assembly 2022 day 1.
Sessions from the INCF Neuroinformatics Assembly 2022 day 2.
Get up to speed about the fundamental principles of full brain network modeling using the open-source neuroinformatics platform The Virtual Brain (TVB). This simulation environment enables the biologically realistic modeling of whole-brain network dynamics across different brain scales, using personalized structural connectome-based approach.
The CAJAL Course in Computational Neuroscience teaches the central ideas, methods, and practice of modern computational neuroscience through a combination of lectures and hands-on project work. This course is designed for graduate students and postdoctoral fellows from a variety of disciplines, including neuroscience, physics, electrical engineering, computer science, mathematics, and psychology.
This module introduces computational neuroscience by simulating neurons according to the AdEx model. You will learn about generative modeling, dynamical systems, and F-I curves. The MATLAB code introduces live scripts and functions.
The emergence of data-intensive science creates a demand for neuroscience educators worldwide to deliver better neuroinformatics education and training in order to raise a generation of modern neuroscientists with FAIR capabilities, awareness of the value of standards and best practices, knowledge in dealing with big datasets, and the ability to integrate knowledge over multiple scales and methods.