Measuring human functional brain networks

By

University of Washington eScience Institute

Difficulty level

Intermediate

Speaker

Caterina Gratton

Type

Duration

50:44

Topic

This lecture and tutorial focuses on measuring human functional brain networks. The lecture and tutorial were part of the 2019 Neurohackademy, a 2-week hands-on summer institute in neuroimaging and data science held at the University of Washington eScience Institute.

Topics covered in this lesson

Overview of human functional connectivity
How to measure human functional brain networks
Forms of variation in functional brain networks
Tutorial

External Links

Link to tutorial and dataset

Link to Neurohackademy

Technology requirement

Gephi visualization and exploration software

Back to the course

Lessons

1

1

Collaborating with Git and GitHub

2

1

Measuring human functional brain networks

3

1

Writing the actual article: Next generation science with Jupyter

4

1

Machine learning with scikit-learn

5

1

6

1

Cloud computing for neuroimaging

7

1

Python packaging

8

1

Data manipulation in Python/Pandas

9

1

Reproducibility in fMRI: what is the problem?

10

1

Meta-analysis and reproducibility

11

1

Introduction to Python

12

1

The FAIR Data Principles

13

2

Functional brain parcellations

14

2

From interactive exploration to reproducible data science: Jupyter, Binder, Travis, and Friends

15

2

The Brain Imaging Data Structure (BIDS)