Measuring human functional brain networks

By

University of Washington eScience Institute

Difficulty level

Intermediate

Speaker

Caterina Gratton

Type

Duration

50:44

Topic

This lecture and tutorial focuses on measuring human functional brain networks. The lecture and tutorial were part of the 2019 Neurohackademy, a 2-week hands-on summer institute in neuroimaging and data science held at the University of Washington eScience Institute.

Topics covered in this lesson

Overview of human functional connectivity
How to measure human functional brain networks
Forms of variation in functional brain networks
Tutorial

External Links

Link to tutorial and dataset

Link to Neurohackademy

Technology requirement

Gephi visualization and exploration software

Back to the course

Lessons

1

1

Machine learning with scikit-learn

2

1

3

1

Cloud computing for neuroimaging

4

1

Python packaging

5

1

Data manipulation in Python/Pandas

6

1

Reproducibility in fMRI: what is the problem?

7

1

Meta-analysis and reproducibility

8

1

Introduction to Python

9

1

The FAIR Data Principles

10

1

Collaborating with Git and GitHub

11

1

Measuring human functional brain networks

12

1

Writing the actual article: Next generation science with Jupyter

13

2

The Brain Imaging Data Structure (BIDS)

14

2

Functional brain parcellations

15

2

From interactive exploration to reproducible data science: Jupyter, Binder, Travis, and Friends