Skip to main content

CaImAn for optical physiology processing and analysis

Difficulty level
Intermediate
Duration
44:37

Overview of the CaImAn package, and demonstration of usage with NWB

Topics covered in this lesson
  • Optical physiology
  • Motion correction
  • ROI segmentation
  • Quality control
  • NWB interface
Prerequisites

What is NWB, with short intro to NWB-enabled tools

Technology requirement

Python, caiman