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Manipulate the default connectome provided with TVB to see how structural lesions effect brain dynamics. In this hands-on session you will insert lesions into the connectome within the TVB graphical user interface. Afterwards the modified connectome will be used for simulations and the resulting activity will be analysed using functional connectivity.

Difficulty level: Beginner
Duration: 31:22
Speaker: : Paul Triebkorn

Tutorial describing the basic search and navigation features of the Allen Mouse Brain Atlas

Difficulty level: Beginner
Duration: 6:40
Speaker: : Unknown

Tutorial describing the basic search and navigation features of the Allen Developing Mouse Brain Atlas

Difficulty level: Beginner
Duration: 6:35
Speaker: : Unknown

Tutorial describing the basic features of the Brain Explorer® 3-D viewer for the mouse brain

Difficulty level: Beginner
Duration: 6:41
Speaker: : Unknown

This tutorial demonstrates how to use the differential search feature of the Allen Mouse Brain Atlas to find gene markers for different regions of the brain and to visualize this gene expression in three-dimensional space. Differential search is also available for the Allen Developing Mouse Brain Atlas and the Allen Human Brain Atlas.

Difficulty level: Beginner
Duration: 6:31
Speaker: : Unknown

The chair of the workshop is giving an introduction and a motivating argument.

Difficulty level: Beginner
Duration: 5:36
Speaker: : Maryann Martone

This lecture highlights the importance of correct annotation and assignment of location, and updated atlas resources to avoid errors in navigation and data interpretation.

Difficulty level: Intermediate
Duration: 22:04
Speaker: : Trygve Leergard

We are at the exciting technological stage where it has become feasible to represent the anatomy of an entire human brain at the cellular level. In this presentation, the speaker explains that neuroanatomy in the XXI Century has become an effort towards the virtualization and standardization of brain tissue.

Difficulty level: Intermediate
Duration: 25:27
Speaker: : Jacopo Annese

This lecture covers essential features of digital brain models for neuroinformatics.

Difficulty level: Intermediate
Duration: 22:26
Speaker: : Douglas Bowden

This presentation covers the neuroinformatics tools and techniques used and their relationship to neuroanatomy for the Allen atlases of the mouse, developing mouse, and mouse connectional atlas.

Difficulty level: Intermediate
Duration: 23:41
Speaker: : Mike Hawrylycz

This lecture covers structured data, databases, federating neuroscience-relevant databases, ontologies. 

Difficulty level: Beginner
Duration: 1:30:45
Speaker: : Maryann Martone

This primer on optogenetics primer discusses how to manipulate neuronal populations with light at millisecond resolution and offers possible applications such as curing the blind and "playing the piano" with cortical neurons.

Difficulty level: Beginner
Duration: 59:06
Speaker: : Clay Reid

Introductory presentation on how data science can help with scientific reproducibility.

Difficulty level: Beginner
Duration:
Speaker: : Michel Dumontier

This lecture covers describing and characterizing an input-output relationship.

Difficulty level: Beginner
Duration: 1:35:33

Part 1 of 2 of a tutorial on statistical models for neural data

Difficulty level: Beginner
Duration: 1:45:48
Speaker: : Jonathan Pillow

Part 2 of 2 of a tutorial on statistical models for neural data.

Difficulty level: Beginner
Duration: 1:50:31
Speaker: : Jonathan Pillow

Introduction to stability analysis of neural models

Difficulty level: Intermediate
Duration: 1:26:06
Speaker: : Bard Ermentrout

Introduction to stability analysis of neural models

Difficulty level: Intermediate
Duration: 1:25:38
Speaker: : Bard Ermentrout

Oscillations and bursting

Difficulty level: Intermediate
Duration: 1:24:30
Speaker: : Bard Ermentrout

Oscillations and bursting

Difficulty level: Intermediate
Duration: 1:31:57
Speaker: : Bard Ermentrout