This tutorial walks participants through the application of dynamic causal modelling (DCM) to fMRI data using MATLAB. Participants are also shown various forms of DCM, how to generate and specify different models, and how to fit them to simulated neural and BOLD data.

This lesson corresponds to slides 158-187 of the PDF below.

Difficulty level: Advanced

Duration: 1:22:10

Speaker: : Peter Bedford, Povilas Karvelis

Optimization for machine learning - Day 02 lecture of the Foundations of Machine Learning in Python course.

*High-Performance Computing and Analytics Lab, University of Bonn*

Difficulty level: Advanced

Duration: 34:52

Speaker: : Moritz Wolter

Linear Algebra for Machine Learning - Day 03 lecture of the Foundations of Machine Learning in Python course.

*High-Performance Computing and Analytics Lab, University of Bonn*

Difficulty level: Advanced

Duration: 57.45

Speaker: : Moritz Wolter

*Support Vector Machines* - Day 06 lecture of the Foundations of Machine Learning in Python course.

*High-Performance Computing and Analytics Lab, University of Bonn*

Difficulty level: Advanced

Duration: 53.39

Speaker: : Elena Trunz

Decision Trees and Random Forests - Day 07 lecture of the Foundations of Machine Learning in Python course.

*High-Performance Computing and Analytics Lab, University of Bonn*

Difficulty level: Advanced

Duration: 1:15:39

Speaker: : Elena Trunz

*Clustering and Density Estimation* - Day 08 lecture of the Foundations of Machine Learning in Python course.

*High-Performance Computing and Analytics Lab, University of Bonn*

Difficulty level: Advanced

Duration: 59:35

Speaker: : Elena Trunz

*Dimensionality Reduction* - Day 09 lecture of the Foundations of Machine Learning in Python course.

*High-Performance Computing and Analytics Lab, University of Bonn*

Difficulty level: Advanced

Duration: 51:02

Speaker: : Elena Trunz

*Introduction to Neural Networks *- Day 10 lecture of the Foundations of Machine Learning in Python course.

*High-Performance Computing and Analytics Lab, University of Bonn*

Difficulty level: Advanced

Duration: 54:12

Speaker: : Moritz Wolter

Introduction to Convolutional Neural Networks* *- Day 11 lecture of the Foundations of Machine Learning in Python course.

*High-Performance Computing and Analytics Lab, University of Bonn*

Difficulty level: Advanced

Duration: 42:07

Speaker: : Moritz Wolter

*Initialization, Optimization, and Regularization** *- Day 12 lecture of the Foundations of Machine Learning in Python course.

*High-Performance Computing and Analytics Lab, University of Bonn*

Difficulty level: Advanced

Duration: 42:07

Speaker: : Moritz Wolter

U-Nets for medical Image-Segmentation* *- Day 13 lecture of the Foundations of Machine Learning in Python course.

*High-Performance Computing and Analytics Lab, University of Bonn*

Difficulty level: Advanced

Duration: 16:45

Speaker: : Moritz Wolter

Sequence Processing - Day 15 lecture of the Foundations of Machine Learning in Python course.

*High-Performance Computing and Analytics Lab, University of Bonn*

Difficulty level: Advanced

Duration: 47:45

Speaker: : Moritz Wolter

Course:

This lecture presents an overview of functional brain parcellations, as well as a set of tutorials on bootstrap agregation of stable clusters (BASC) for fMRI brain parcellation.

Difficulty level: Advanced

Duration: 50:28

Speaker: : Pierre Bellec

Course:

This tutorial demonstrates how to work with neuronal data using MATLAB, including actional potentials and spike counts, orientation tuing curves in visual cortex, and spatial maps of firing rates.

Difficulty level: Intermediate

Duration: 5:17

Speaker: : Mike X. Cohen

Course:

In this lesson, users will learn how to appropriately sort and bin neural spikes, allowing for the generation of a common and powerful visualization tool in neuroscience, the histogram.

Difficulty level: Intermediate

Duration: 5:31

Speaker: : Mike X. Cohen

Course:

Followers of this lesson will learn how to compute, visualize and quantify the tuning curves of individual neurons.

Difficulty level: Intermediate

Duration: 13:48

Speaker: : Mike X. Cohen

Course:

This lesson demonstrates how to programmatically generate a spatial map of neuronal spike counts using MATLAB.

Difficulty level: Intermediate

Duration: 12:16

Speaker: : Mike X. Cohen

Course:

In this lesson, users are shown how to create a spatial map of neuronal orientation tuning.

Difficulty level: Intermediate

Duration: 13:11

Speaker: : Mike X. Cohen

Course:

This lecture introduces neuroscience concepts and methods such as fMRI, visual respones in BOLD data, and the eccentricity of visual receptive fields.

Difficulty level: Intermediate

Duration: 7:15

Speaker: : Mike X. Cohen

Course:

This tutorial walks users through the creation and visualization of activation flat maps from fMRI datasets.

Difficulty level: Intermediate

Duration: 12:15

Speaker: : Mike X. Cohen

- Bayesian networks (3)
- (-) Standards and Best Practices (2)
- Notebooks (1)
- (-) Machine learning (23)
- Animal models (1)
- Brain-hardware interfaces (1)
- Clinical neuroscience (2)
- (-) General neuroscience (14)
- General neuroinformatics (11)
- Computational neuroscience (24)
- Statistics (5)
- (-) Computer Science (2)
- Genomics (8)
- Data science (2)
- (-) Open science (4)