Skip to main content

Users following this tutorial will learn how to identify and discard bad EEG data segments using the MATLAB toolbox EEGLAB. 

Difficulty level: Beginner
Duration: 11:25
Speaker: : Arnaud Delorme

This lecture contains an overview of the Australian Electrophysiology Data Analytics Platform (AEDAPT), how it works, how to scale it, and how it fits into the FAIR ecosystem.

Difficulty level: Beginner
Duration: 18:56
Speaker: : Tom Johnstone

To explore the challenges and the ethical issues raised by advances in do-it-yourself (DIY) neurotechnology, the Emerging Issues Task Force of the International Neuroethics Society organized a virtual panel discussion. The panel discussed neurotechnologies such as transcranial direct current stimulation (tDCS) and electroencephalogram (EEG) headsets and their ability to change the way we understand and alter our brains. Particular attention will be given to the use of neurotechnology by everyday people and the implications this has for regulatory oversight and citizen neuroscience. 

Difficulty level: Beginner
Duration: 1:00:59

This module covers many of the types of non-invasive neurotech and neuroimaging devices including electroencephalography (EEG), electromyography (EMG), electroneurography (ENG), magnetoencephalography (MEG), and more. 

Difficulty level: Beginner
Duration: 13:36
Speaker: : Harrison Canning
Course:

An introduction to data management, manipulation, visualization, and analysis for neuroscience. Students will learn scientific programming in Python, and use this to work with example data from areas such as cognitive-behavioral research, single-cell recording, EEG, and structural and functional MRI. Basic signal processing techniques including filtering are covered. The course includes a Jupyter Notebook and video tutorials.

 

Difficulty level: Beginner
Duration: 1:09:16
Speaker: : Aaron J. Newman

Hierarchical Event Descriptors (HED) fill a major gap in the neuroinformatics standards toolkit, namely the specification of the nature(s) of events and time-limited conditions recorded as having occurred during time series recordings (EEG, MEG, iEEG, fMRI, etc.). Here, the HED Working Group presents an online INCF workshop on the need for, structure of, tools for, and use of HED annotation to prepare neuroimaging time series data for storing, sharing, and advanced analysis. 

     

    Difficulty level: Beginner
    Duration: 03:37:42
    Speaker: :

    This lecture presents an overview of functional brain parcellations, as well as a set of tutorials on bootstrap agregation of stable clusters (BASC) for fMRI brain parcellation.

    Difficulty level: Advanced
    Duration: 50:28
    Speaker: : Pierre Bellec
    Course:

    Maximize Your Research With Cloud Workspaces is a talk aimed at researchers who are looking for innovative ways to set up and execute their life science data analyses in a collaborative, extensible, open-source cloud environment. This panel discussion is brought to you by MetaCell and scientists from leading universities who share their experiences of advanced analysis and collaborative learning through the Cloud.

     

    Difficulty level: Beginner
    Duration: 55:43

    In this lecture, you will learn about virtual research environments (VREs) and their technical limitations, (i.e., a computing platform and the software stack behind it) and the security measures which should be considered during implementation. 

    Difficulty level: Beginner
    Duration: 1:06:50
    Speaker: : Marc Sacks

    This lesson provides an overview of how to conceptualize, design, implement, and maintain neuroscientific pipelines in via the cloud-based computational reproducibility platform Code Ocean. 

    Difficulty level: Beginner
    Duration: 17:01
    Speaker: : David Feng

    In this workshop talk, you will receive a tour of the Code Ocean ScienceOps Platform, a centralized cloud workspace for all teams. 

    Difficulty level: Beginner
    Duration: 10:24
    Speaker: : Frank Zappulla

    This lecture covers a wide range of aspects regarding neuroinformatics and data governance, describing both their historical developments and current trajectories. Particular tools, platforms, and standards to make your research more FAIR are also discussed.

    Difficulty level: Beginner
    Duration: 54:58
    Speaker: : Franco Pestilli

    This short walkthrough documents the steps needed to find a dataset in OpenNeuro, a free and open platform for sharing MRI, MEG, EEG, iEEG, ECoG, ASL, and PET data, and import it directly to a brainlife project. 

    Difficulty level: Beginner
    Duration: 0:35
    Speaker: :

    This short video walks you through the steps of publishing a dataset on brainlife, an open-source, free and secure reproducible neuroscience analysis platform.

    Difficulty level: Beginner
    Duration: 1:18
    Speaker: :

    This lesson provides a brief visual walkthrough on the necessary steps when copying data from one brainlife project to another. 

    Difficulty level: Beginner
    Duration: 1:07
    Speaker: :

    This lesson visually documents the process of uploading data to brainlife via the command line interface (CLI). 

    Difficulty level: Beginner
    Duration: 1:28
    Speaker: :

    This video shows how to use the brainlife.io interface to edit the participants' info file. This file is the ParticipantInfo.json file of the Brain Imaging Data Structure (BIDS).

    Difficulty level: Beginner
    Duration: 0:34
    Speaker: :

    This video will document the process of running an app on brainlife, from data staging to archiving of the final data outputs.

    Difficulty level: Beginner
    Duration: 3:43
    Speaker: :

    This video will document the process of visualizing the provenance of each step performed to generate a data object on brainlife.

    Difficulty level: Beginner
    Duration: 0:21
    Speaker: :

    This video will document the process of downloading and running the "reproduce.sh" script, which will automatically run all of the steps to generate a data object locally on a user's machine.

    Difficulty level: Beginner
    Duration: 3:44
    Speaker: :