Lesson type
Difficulty level
Learn how to create a standard extracellular electrophysiology dataset in NWB using Python
Difficulty level: Intermediate
Duration: 23:10
Speaker: : Ryan Ly
Learn how to create a standard calcium imaging dataset in NWB using Python
Difficulty level: Intermediate
Duration: 31:04
Speaker: : Ryan Ly
Learn how to create a standard intracellular electrophysiology dataset in NWB
Difficulty level: Intermediate
Duration: 20:23
Speaker: : Pamela Baker
Learn how to use the icephys-metadata extension to enter meta-data detailing your experimental paradigm
Difficulty level: Intermediate
Duration: 27:18
Speaker: : Oliver Ruebel
Learn how to build and share extensions in NWB
Difficulty level: Advanced
Duration: 20:29
Speaker: : Ryan Ly
Learn how to build custom APIs for extension
Difficulty level: Advanced
Duration: 25:40
Speaker: : Andrew Tritt
Learn how to handle writing very large data in PyNWB
Difficulty level: Advanced
Duration: 26:50
Speaker: : Andrew Tritt
Learn how to create a standard extracellular electrophysiology dataset in NWB using MATLAB
Difficulty level: Intermediate
Duration: 45:46
Speaker: : Ben Dichter
Learn how to create a standard calcium imaging dataset in NWB using MATLAB
Difficulty level: Intermediate
Duration: 39:10
Speaker: : Ben Dichter
Learn how to create a standard intracellular electrophysiology dataset in NWB
Difficulty level: Intermediate
Duration: 20:22
Speaker: : Pamela Baker
Learn how to handle writing very large data in MatNWB
Difficulty level: Advanced
Duration: 16:18
Speaker: : Ben Dichter
Overview of the Braintorm package for analyzing extracellular electrophysiology, including preprocessing, spike sorting, trial alignment, and spectrotemporal decomposition
Difficulty level: Intermediate
Duration: 47:47
Speaker: : Konstantinos Nasiotis
Overview of the CaImAn package, and demonstration of usage with NWB
Difficulty level: Intermediate
Duration: 44:37
Speaker: : Andrea Giovannucci
Overview of the SpikeInterface package, including demonstration of data loading, preprocessing, spike sorting, and comparison of spike sorters
Difficulty level: Intermediate
Duration: 1:10:28
Speaker: : Alessio Buccino
Overview of the NWBWidgets package, including coverage of different data types, and information for building custom widgets within this framework
Difficulty level: Intermediate
Duration: 47:15
Speaker: : Ben Dichter
Elizabeth Dupre provides reviews some standards for project management and organization, including motivation in the view of the FAIR principles and improved reproducibility.
Difficulty level: Beginner
Duration: 01:08:34
Speaker: : Elizabeth DuPre
This lecture provides an overview of depression (epidemiology and course of the disorder), clinical presentation, somatic co-morbidity, and treatment options.
Difficulty level: Beginner
Duration: 37:51
Speaker: : Barbara Sperner-Unterweger
NWB: An ecosystem for neurophysiology data standardization
Difficulty level: Beginner
Duration: 29:53
Speaker: : Oliver Ruebel
The course is an introduction to the field of electrophysiology standards, infrastructure, and initiatives. This lecture discusses the FAIR principles as they apply to electrophysiology data and metadata, the building blocks for community tools and standards, platforms and grassroots initiatives, and the challenges therein.
Difficulty level: Beginner
Duration: 8:11
Speaker: : Thomas Wachtler
The course is an introduction to the field of electrophysiology standards, infrastructure, and initiatives.
This lecture contains an overview of electrophysiology data reuse within the EBRAINS ecosystem.
Difficulty level: Beginner
Duration: 15:57
Speaker: : Andrew Davison