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This lecture covers an introduction to neuroinformatics and its subfields, the content of the short course and future neuroinformatics applications.

Difficulty level: Beginner
Duration: 34:27

In this presentation by the OHBM OpenScienceSIG, Tom Shaw and Steffen Bollmann cover how containers can be useful for running the same software on different platforms and sharing analysis pipelines with other researchers. They demonstrate how to build docker containers from scratch, using Neurodocker, and cover how to use containers on an HPC with singularity.

 

 

Difficulty level: Beginner
Duration: 01:21:59

As models in neuroscience have become increasingly complex, it has become more difficult to share all aspects of models and model analysis, hindering model accessibility and reproducibility. In this session, we will discuss existing resources for promoting FAIR data and models in computational neuroscience, their impact on the field, and the remaining barriers. This lecture covers how to make modeling workflows FAIR by working through a practical example, dissecting the steps within the workflow, and detailing the tools and resources used at each step.

Difficulty level: Beginner
Duration: 15:14

A basic introduction to clinical presentation of schizophrenia, its etiology, and current treatment options.

Difficulty level: Beginner
Duration: 51:49

The INS Emerging Issues Task Force held a virtual panel discussion on the evolving role and increased adoption of digital applications to deliver mental health care. It was held as a session at the annual conference of the Italian Society for Neuroethics. Speakers were:

  • Nicole Martinez Martin, Stanford University
  • Cynthia Sieck, Ohio State University
  • John Torous, Harvard Medical School
  • Anthony Weiss, Beth Israel Deaconess Medical Center
Difficulty level: Beginner
Duration: 58:30

Introduction to the course Cellular Mechanisms of Brain Function.

Difficulty level: Beginner
Duration: 12:20
Speaker: : Carl Petersen

Introduction to the course Cellular Mechanisms of Brain Function.

Difficulty level: Beginner
Duration: 12:20
Speaker: : Carl Petersen

Ion channels and the movement of ions across the cell membrane.

Difficulty level: Beginner
Duration: 25:51
Speaker: : Carl Petersen

Action potential initiation and propagation.

Difficulty level: Beginner
Duration: 09:13
Speaker: : Carl Petersen

Synaptic transmission and neurotransmitters

Difficulty level: Beginner
Duration: 28:22
Speaker: : Carl Petersen

This lecture covers NeuronUnit, a library that builds upon SciUnit and integrates with several existing neuroinformatics resources to support validating single-neuron models using data gathered by neurophysiologists.

Difficulty level: Intermediate
Duration: 17:21
Speaker: : Richard Gerkin

An introduction to the NeuroElectro project, which aims to organize information on cellular neurophysiology. Speaker: Shreejoy Tripathy

Difficulty level: Intermediate
Duration: 17:41

Simultaneously recorded neurons in non-human primates coordinate their spiking activity in a sequential manner that mirrors the dominant wave propagation directions of the local field potentials.

Difficulty level: Intermediate
Duration: 26:54

This talk covers statistical analysis of spike train data, the modeling approach GLM, and the problem of assessing neural synchrony.

Difficulty level: Intermediate
Duration: 25:17
Speaker: : Rob Kass

This talk covers statistical methods for characterizing neural population responses and extracting structure from high-dimensional neural data.

Difficulty level: Intermediate
Duration: 26:15
Speaker: : Jonathan Pillow

This presentation covers research to understand the activity of single neurons and populations of neurons in the visual system.

Difficulty level: Intermediate
Duration: 28:23
Speaker: : Matteo Carandini

Learn how to create a standard extracellular electrophysiology dataset in NWB using Python

Difficulty level: Intermediate
Duration: 23:10
Speaker: : Ryan Ly

Learn how to create a standard calcium imaging dataset in NWB using Python

Difficulty level: Intermediate
Duration: 31:04
Speaker: : Ryan Ly

Learn how to create a standard intracellular electrophysiology dataset in NWB

Difficulty level: Intermediate
Duration: 20:23
Speaker: : Pamela Baker

Learn how to use the icephys-metadata extension to enter meta-data detailing your experimental paradigm

Difficulty level: Intermediate
Duration: 27:18
Speaker: : Oliver Ruebel