Difficulty level

In this tutorial, users will learn how to create a trial-averaged BOLD response and store it in a matrix in MATLAB.

Difficulty level: Intermediate
Duration: 20:12
Speaker: : Mike X. Cohen

This tutorial teaches users how to create animations of BOLD responses over time, to allow researchers and clinicians to visualize time-course activity patterns.

Difficulty level: Intermediate
Duration: 12:52
Speaker: : Mike X. Cohen

This tutorial demonstrates how to use MATLAB to create event-related BOLD time courses from fMRI datasets.

Difficulty level: Intermediate
Duration: 13:39
Speaker: : Mike X. Cohen

In this tutorial, users learn how to compute and visualize a t-test on experimental condition differences.

Difficulty level: Intermediate
Duration: 17:54
Speaker: : Mike X. Cohen

This lesson introduces various methods in MATLAB useful for dealing with data generated by calcium imaging.

Difficulty level: Intermediate
Duration: 5:02
Speaker: : Mike X. Cohen

This tutorial demonstrates how to use MATLAB to generate and visualize animations of calcium fluctuations over time.

Difficulty level: Intermediate
Duration: 15:01
Speaker: : Mike X. Cohen

This tutorial instructs users how to use MATLAB to programmatically convert data from cells to a matrix.

Difficulty level: Intermediate
Duration: 5:15
Speaker: : Mike X. Cohen

In this tutorial, users will learn how to identify and remove background noise, or "blur", an important step in isolating cell bodies from image data.

Difficulty level: Intermediate
Duration: 17:08
Speaker: : Mike X. Cohen

This lesson teaches users how MATLAB can be used to apply image processing techniques to identify cell bodies based on contiguity.

Difficulty level: Intermediate
Duration: 11:23
Speaker: : Mike X. Cohen

This tutorial demonstrates how to extract the time course of calcium activity from each clusters of neuron somata, and store the data in a MATLAB matrix.

Difficulty level: Intermediate
Duration: 22:41
Speaker: : Mike X. Cohen

This lesson demonstrates how to use MATLAB to implement a multivariate dimension reduction method, PCA, on time series data.

Difficulty level: Intermediate
Duration: 17:19
Speaker: : Mike X. Cohen

This is a tutorial introducing participants to the basics of RNA-sequencing data and how to analyze its features using Seurat.

Difficulty level: Intermediate
Duration: 1:19:17
Speaker: : Sonny Chen

This tutorial introduces pipelines and methods to compute brain connectomes from fMRI data. With corresponding code and repositories, participants can follow along and learn how to programmatically preprocess, curate, and analyze functional and structural brain data to produce connectivity matrices.

Difficulty level: Intermediate
Duration: 1:39:04

This is a tutorial on designing a Bayesian inference model to map belief trajectories, with emphasis on gaining familiarity with Hierarchical Gaussian Filters (HGFs).

This lesson corresponds to slides 65-90 of the PDF below.

Difficulty level: Intermediate
Duration: 1:15:04
Speaker: : Daniel Hauke

This lesson introduces the practical exercises which accompany the previous lessons on animal and human connectomes in the brain and nervous system.

Difficulty level: Intermediate
Duration: 4:10
Speaker: : Dan Goodman

This tutorial provides instruction on how to simulate brain tumors with TVB (reproducing publication: Marinazzo et al. 2020 Neuroimage). This tutorial comprises a didactic video, jupyter notebooks, and full data set for the construction of virtual brains from patients and health controls.

Difficulty level: Intermediate
Duration: 10:01

This lecture and tutorial focuses on measuring human functional brain networks, as well as how to account for inherent variability within those networks.

Difficulty level: Intermediate
Duration: 50:44
Speaker: : Caterina Gratton

In this lesson, you will learn about the Python project Nipype, an open-source, community-developed initiative under the umbrella of NiPy. Nipype provides a uniform interface to existing neuroimaging software and facilitates interaction between these packages within a single workflow.

Difficulty level: Intermediate
Duration: 1:25:05
Speaker: : Satrajit Ghosh