This lecture presents the Medical Informatics Platform's data federation in epilepsy.
This lecture aims to help researchers, students, and health care professionals understand the place for neuroinformatics in the patient journey using the exemplar of an epilepsy patient.
This talk introduces data sharing initiatives in Epilepsy, particularly across Europe.
In this talk the speakers will give a brief introduction of the Fenix Infrastructure and Service Offering, before focusing on Data Safety. The speaker will take the participants through the ETHZ-CSCS offering for EBRAINS and all the HBP Communities highlighting the Infrastructure role in a service implementation in respect of Security. Particular attention will be on showing what tools ETHZ-CSCS provides to a Portal/Service provider such as EBRAINS, MIP/HIP, TVB, NRP amongst others. Finally there will be given a quick glimpse into the future and the role that “multi-tenancy” will play.
In this lesson, users will learn about human brain signals as measured by electroencephalography (EEG), as well as associated neural signatures such as steady state visually evoked potentials (SSVEPs) and alpha oscillations.
This is a continuation of the talk on the cellular mechanisms of neuronal communication, this time at the level of brain microcircuits and associated global signals like those measureable by electroencephalography (EEG). This lecture also discusses EEG biomarkers in mental health disorders, and how those cortical signatures may be simulated digitally.
This lecture gives an overview of how to prepare and preprocess neuroimaging (EEG/MEG) data for use in TVB.
Learn how to create a standard extracellular electrophysiology dataset in NWB using Python.
Learn how to create a standard calcium imaging dataset in NWB using Python.
In this tutorial, you will learn how to create a standard intracellular electrophysiology dataset in NWB using Python.
In this tutorial, you will learn how to use the icephys-metadata extension to enter meta-data detailing your experimental paradigm.
In this tutorial, users learn how to create a standard extracellular electrophysiology dataset in NWB using MATLAB.
Learn how to create a standard calcium imaging dataset in NWB using MATLAB.
Learn how to create a standard intracellular electrophysiology dataset in NWB.
This lesson gives an overview of the Brainstorm package for analyzing extracellular electrophysiology, including preprocessing, spike sorting, trial alignment, and spectrotemporal decomposition.
This lesson provides an overview of the CaImAn package, as well as a demonstration of usage with NWB.
This lesson gives an overview of the SpikeInterface package, including demonstration of data loading, preprocessing, spike sorting, and comparison of spike sorters.
In this lesson, users will learn about the NWBWidgets package, including coverage of different data types, and information for building custom widgets within this framework.
This lesson is a general overview of overarching concepts in neuroinformatics research, with a particular focus on clinical approaches to defining, measuring, studying, diagnosing, and treating various brain disorders. Also described are the complex, multi-level nature of brain disorders and the data associated with them, from genes and individual cells up to cortical microcircuits and whole-brain network dynamics. Given the heterogeneity of brain disorders and their underlying mechanisms, this lesson lays out a case for multiscale neuroscience data integration.
This lecture provides an introduction to entropy in general, and multi-scale entropy (MSE) in particular, highlighting the potential clinical applications of the latter.