Course:

In this tutorial, users will learn how to create a trial-averaged BOLD response and store it in a matrix in MATLAB.

Difficulty level: Intermediate

Duration: 20:12

Speaker: : Mike X. Cohen

Course:

This tutorial teaches users how to create animations of BOLD responses over time, to allow researchers and clinicians to visualize time-course activity patterns.

Difficulty level: Intermediate

Duration: 12:52

Speaker: : Mike X. Cohen

Course:

This tutorial demonstrates how to use MATLAB to create event-related BOLD time courses from fMRI datasets.

Difficulty level: Intermediate

Duration: 13:39

Speaker: : Mike X. Cohen

Course:

In this tutorial, users learn how to compute and visualize a t-test on experimental condition differences.

Difficulty level: Intermediate

Duration: 17:54

Speaker: : Mike X. Cohen

Course:

This lesson introduces various methods in MATLAB useful for dealing with data generated by calcium imaging.

Difficulty level: Intermediate

Duration: 5:02

Speaker: : Mike X. Cohen

Course:

This tutorial demonstrates how to use MATLAB to generate and visualize animations of calcium fluctuations over time.

Difficulty level: Intermediate

Duration: 15:01

Speaker: : Mike X. Cohen

Course:

This tutorial instructs users how to use MATLAB to programmatically convert data from cells to a matrix.

Difficulty level: Intermediate

Duration: 5:15

Speaker: : Mike X. Cohen

Course:

In this tutorial, users will learn how to identify and remove background noise, or "blur", an important step in isolating cell bodies from image data.

Difficulty level: Intermediate

Duration: 17:08

Speaker: : Mike X. Cohen

Course:

This lesson teaches users how MATLAB can be used to apply image processing techniques to identify cell bodies based on contiguity.

Difficulty level: Intermediate

Duration: 11:23

Speaker: : Mike X. Cohen

Course:

This tutorial demonstrates how to extract the time course of calcium activity from each clusters of neuron somata, and store the data in a MATLAB matrix.

Difficulty level: Intermediate

Duration: 22:41

Speaker: : Mike X. Cohen

Course:

This lesson demonstrates how to use MATLAB to implement a multivariate dimension reduction method, PCA, on time series data.

Difficulty level: Intermediate

Duration: 17:19

Speaker: : Mike X. Cohen

This is a tutorial introducing participants to the basics of RNA-sequencing data and how to analyze its features using Seurat.

Difficulty level: Intermediate

Duration: 1:19:17

Speaker: : Sonny Chen

This lesson describes spike timing-dependent plasticity (STDP), a biological process that adjusts the strength of connections between neurons in the brain, and how one can implement or mimic this process in a computational model. You will also find links for practical exercises at the bottom of this page.

Difficulty level: Intermediate

Duration: 12:50

Speaker: : Dan Goodman

This lesson provides a brief introduction to the *Computational Modeling of Neuronal Plasticity.*

Difficulty level: Intermediate

Duration: 0:40

Speaker: : Florence I. Kleberg

In this lesson, you will be introducted to a type of neuronal model known as the leaky integrate-and-fire (LIF) model.

Difficulty level: Intermediate

Duration: 1:23

Speaker: : Florence I. Kleberg

This lesson goes over various potential inputs to neuronal synapses, loci of neural communication.

Difficulty level: Intermediate

Duration: 1:20

Speaker: : Florence I. Kleberg

This lesson describes the how and why behind implementing integration time steps as part of a neuronal model.

Difficulty level: Intermediate

Duration: 1:08

Speaker: : Florence I. Kleberg

In this lesson, you will learn about neural spike trains which can be characterized as having a Poisson distribution.

Difficulty level: Intermediate

Duration: 1:18

Speaker: : Florence I. Kleberg

This lesson covers spike-rate adaptation, the process by which a neuron's firing pattern decays to a low, steady-state frequency during the sustained encoding of a stimulus.

Difficulty level: Intermediate

Duration: 1:26

Speaker: : Florence I. Kleberg

This lesson provides a brief explanation of how to implement a neuron's refractory period in a computational model.

Difficulty level: Intermediate

Duration: 0:42

Speaker: : Florence I. Kleberg

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