This is a hands-on tutorial on PLINK, the open source whole genome association analysis toolset. The aims of this tutorial are to teach users how to perform basic quality control on genetic datasets, as well as to identify and understand GWAS summary statistics. 

This tutorial demonstrates how to perform cell-type deconvolution in order to estimate how proportions of cell-types in the brain change in response to various conditions. While these techniques may be useful in addressing a wide range of scientific questions, this tutorial will focus on the cellular changes associated with major depression (MDD). 

This is an in-depth guide on EEG signals and their interaction within brain microcircuits. Participants are also shown techniques and software for simulating, analyzing, and visualizing these signals.

This tutorial introduces pipelines and methods to compute brain connectomes from fMRI data. With corresponding code and repositories, participants can follow along and learn how to programmatically preprocess, curate, and analyze functional and structural brain data to produce connectivity matrices. 

In this third and final hands-on tutorial from the Research Workflows for Collaborative Neuroscience workshop, you will learn about workflow orchestration using open source tools like DataJoint and Flyte. 

This video will document the process of creating a pipeline rule for batch processing on brainlife.

This lesson contains practical exercises which accompanies the first few lessons of the Neuroscience for Machine Learners (Neuro4ML) course. 

This lesson introduces some practical exercises which accompany the Synapses and Networks portion of this Neuroscience for Machine Learners course. 

This lesson introduces the practical exercises which accompany the previous lessons on animal and human connectomes in the brain and nervous system. 

This video briefly goes over the exercises accompanying Week 6 of the Neuroscience for Machine Learners (Neuro4ML) course, Understanding Neural Networks.

Explore how to setup an epileptic seizure simulation with the TVB graphical user interface. This lesson will show you how to program the epileptor model in the brain network to simulate a epileptic seizure originating in the hippocampus. It will also show how to upload and view mouse connectivity data, as well as give a short introduction to the python script interface of TVB.

This tutorial covers the fundamentals of collaborating with Git and GitHub.

This lecture and tutorial focuses on measuring human functional brain networks, as well as how to account for inherent variability within those networks. 

This lesson gives an introduction to the central concepts of machine learning, and how they can be applied in Python using the scikit-learn package. 

This lecture covers concepts associated with neural nets, including rotation and squashing, and is a part of the Deep Learning Course at New York University's Center for Data Science (CDS).

This lecture covers the concept of neural nets training (tools, classification with neural nets, and PyTorch implementation) and is a part of the Deep Learning Course at NYU's Center for Data Science.

This lecture discusses the concept of natural signals properties and the convolutional nets in practice and is a part of the Deep Learning Course at NYU's Center for Data Science.

This lecture covers the concept of recurrent neural networks: vanilla and gated (LSTM) and is a part of the Deep Learning Course at NYU's Center for Data Science.

This lecture covers the concept of inference in latent variable energy based models (LV-EBMs) and is a part of the Deep Learning Course at NYU's Center for Data Science. 

This tutorial covers the concept of training latent variable energy based models (LV-EBMs) and is is a part of the Deep Learning Course at NYU's Center for Data Science.