This lecture provides an introduction to the Brain Imaging Data Structure (BIDS), a standard for organizing human neuroimaging datasets.
This lesson outlines Neurodata Without Borders (NWB), a data standard for neurophysiology which provides neuroscientists with a common standard to share, archive, use, and build analysis tools for neurophysiology data.
This lecture covers the rationale for developing the DAQCORD, a framework for the design, documentation, and reporting of data curation methods in order to advance the scientific rigour, reproducibility, and analysis of data.
This tutorial demonstrates how to use PyNN, a simulator-independent language for building neuronal network models, in conjunction with the neuromorphic hardware system SpiNNaker.
This video will document the process of creating a pipeline rule for batch processing on brainlife.
This video will document the process of launching a Jupyter Notebook for group-level analyses directly from brainlife.
This lecture introduces you to the basics of the Amazon Web Services public cloud. It covers the fundamentals of cloud computing and goes through both the motivations and processes involved in moving your research computing to the cloud.
This lesson continues from part one of the lecture Ontologies, Databases, and Standards, diving deeper into a description of ontologies and knowledg graphs.
This lecture focuses on ontologies for clinical neurosciences.
Learn how to create a standard extracellular electrophysiology dataset in NWB using Python.
Learn how to create a standard calcium imaging dataset in NWB using Python.
In this tutorial, you will learn how to create a standard intracellular electrophysiology dataset in NWB using Python.
In this tutorial, you will learn how to use the icephys-metadata extension to enter meta-data detailing your experimental paradigm.
In this tutorial, users learn how to create a standard extracellular electrophysiology dataset in NWB using MATLAB.
Learn how to create a standard calcium imaging dataset in NWB using MATLAB.
Learn how to create a standard intracellular electrophysiology dataset in NWB.
This lesson gives an overview of the Brainstorm package for analyzing extracellular electrophysiology, including preprocessing, spike sorting, trial alignment, and spectrotemporal decomposition.
This lesson provides an overview of the CaImAn package, as well as a demonstration of usage with NWB.
This lesson gives an overview of the SpikeInterface package, including demonstration of data loading, preprocessing, spike sorting, and comparison of spike sorters.
In this lesson, users will learn about the NWBWidgets package, including coverage of different data types, and information for building custom widgets within this framework.