This lecture introduces neuroscience concepts and methods such as fMRI, visual respones in BOLD data, and the eccentricity of visual receptive fields.
This tutorial walks users through the creation and visualization of activation flat maps from fMRI datasets.
This tutorial demonstrates to users the conventional preprocessing steps when working with BOLD signal datasets from fMRI.
In this tutorial, users will learn how to create a trial-averaged BOLD response and store it in a matrix in MATLAB.
This tutorial teaches users how to create animations of BOLD responses over time, to allow researchers and clinicians to visualize time-course activity patterns.
This tutorial demonstrates how to use MATLAB to create event-related BOLD time courses from fMRI datasets.
In this tutorial, users learn how to compute and visualize a t-test on experimental condition differences.
This lesson introduces various methods in MATLAB useful for dealing with data generated by calcium imaging.
This tutorial demonstrates how to use MATLAB to generate and visualize animations of calcium fluctuations over time.
This tutorial instructs users how to use MATLAB to programmatically convert data from cells to a matrix.
In this tutorial, users will learn how to identify and remove background noise, or "blur", an important step in isolating cell bodies from image data.
This lesson teaches users how MATLAB can be used to apply image processing techniques to identify cell bodies based on contiguity.
This tutorial demonstrates how to extract the time course of calcium activity from each clusters of neuron somata, and store the data in a MATLAB matrix.
This lesson demonstrates how to use MATLAB to implement a multivariate dimension reduction method, PCA, on time series data.
This lecture presents the Medical Informatics Platform's data federation in epilepsy.
This is the first of two workshops on reproducibility in science, during which participants are introduced to concepts of FAIR and open science. After discussing the definition of and need for FAIR science, participants are walked through tutorials on installing and using Github and Docker, the powerful, open-source tools for versioning and publishing code and software, respectively.
This is a hands-on tutorial on PLINK, the open source whole genome association analysis toolset. The aims of this tutorial are to teach users how to perform basic quality control on genetic datasets, as well as to identify and understand GWAS summary statistics.
This is a tutorial on using the open-source software PRSice to calculate a set of polygenic risk scores (PRS) for a study sample. Users will also learn how to read PRS into R, visualize distributions, and perform basic association analyses.
This lesson describes the principles underlying functional magnetic resonance imaging (fMRI), diffusion-weighted imaging (DWI), tractography, and parcellation. These tools and concepts are explained in a broader context of neural connectivity and mental health.
This is an introductory lecture on whole-brain modelling, delving into the various spatial scales of neuroscience, neural population models, and whole-brain modelling. Additionally, the clinical applications of building and testing such models are characterized.