Skip to main content
Course:

KnowledgeSpace is a community-based encyclopedia that links brain research concepts to data, models, and literature. It provides users with access to anatomy, gene expression, models, morphology, and physiology data from over 15 different neuroscience data/model repositories, such as Allen Institute for Brain Science and the Human Brain Project.

Difficulty level: Beginner
Duration: 0:58
Speaker: : Tom Gillespie

The Identifiers.org system is a central infrastructure for findable, accessible, interoperable and re-usable (FAIR) data. It provides a range of services to generate, resolve and validate persistent Compact Identifiers to promote the citability of individual data providers and integration with e-infrastructures.

Difficulty level: Beginner
Duration: 36:41

Enabling neuroscience research using high performance computing

Difficulty level: Beginner
Duration: 39:27
Speaker: : Subha Sivagnanam
Difficulty level: Beginner
Duration: 48:22
Speaker: : Michael Feolo

EEGLAB is an interactive Matlab toolbox for processing continuous and event-related EEG, MEG and other electrophysiological data incorporating independent component analysis (ICA), time/frequency analysis, artifact rejection, event-related statistics, and several useful modes of visualization of the averaged and single-trial data. EEGLAB runs under Linux, Unix, Windows, and Mac OS X.

Difficulty level: Beginner
Duration: 15:32
Speaker: : Arnaud Delorme
Difficulty level: Beginner
Duration: 9:20
Speaker: :
Difficulty level: Beginner
Duration: 8:30
Speaker: : Arnaud Delorme
Difficulty level: Beginner
Duration: 13:01
Speaker: : Arnaud Delorme

This talk highlights a set of platform technologies, software, and data collections that close and shorten the feedback cycle in research. 

Difficulty level: Beginner
Duration: 57:52
Speaker: : Satrajit Ghosh

An agent for reproducible neuroimaging

Difficulty level: Beginner
Duration: 1:00:10
Speaker: : David Kennedy

Demo of the BRIAN Simulator. BRIAN is a free, open source simulator for spiking neural networks. It is written in the Python programming language and is available on almost all platforms. We believe that a simulator should not only save the time of processors, but also the time of scientists. Brian is therefore designed to be easy to learn and use, highly flexible and easily extensible.

Difficulty level: Beginner
Duration: 1:27:32
Speaker: : Marcel Stimberg

NeuroFedora is a volunteer driven initiative to provide a ready to use Fedora based Free/Open Source Software platform for neuroscience. We believe that similar to Free Software, science should be free for all to use, share, modify, and study. The use of Free Software also aids reproducibility, data sharing, and collaboration in the research community. By making the tools used in the scientific process easier to use, NeuroFedora aims to take a step to enable this ideal. The CompNeuro Fedora Lab was specially to enable computational neuroscience. It includes everything you will need to get your work done—modelling software, analysis tools, general productivity tools—all well integrated with the modern GNOME platform to give you a complete operating system.

Difficulty level: Beginner
Duration: 1:06:08
Speaker: : Ankur Sinha

neurolib is a computational framework for simulating coupled neural mass models written in Python. It helps you to easily load structural brain scan data to construct brain networks where each node is a neural mass representing a single brain area. This network model can be used to simulate whole-brain dynamics. neurolib provides a simulation and optimization framework which allows you to easily implement your own neural mass model, simulate fMRI BOLD activity, analyse the results and fit your model to empirical data.

Difficulty level: Beginner
Duration: 1:06:53
Speaker: : Çağlar Çakan