This lecture presents the Graphical (GUI) and Command Line (CLI) User Interface of TVB. Alongside with the speakers, explore and interact with all means necessary to generate, manipulate and visualize connectivity and network dynamics.
This lecture briefly introduces The Virtual Brain (TVB), a multi-scale, multi-modal neuroinformatics platform for full brain network simulations using biologically realistic connectivity, as well as its potential neuroscience applications (e.g., epilepsy cases).
This lecture introduces the theoretical background and foundations that led to the development of TVB, its architecture, and features of its major software components.
In this tutorial, you will learn how to use TVB-NEST toolbox on your local computer.
This tutorial provides instruction on how to perform multi-scale simulation of Alzheimer's disease on The Virtual Brain Simulation Platform.
This presentation accompanies the paper entitled: An automated pipeline for constructing personalized virtual brains from multimodal neuroimaging data (see link below to download publication).
This lecture provides an overview of successful open-access projects aimed at describing complex neuroscientific models, and makes a case for expanded use of resources in support of reproducibility and validation of models against experimental data.
This lesson provides an introduction to the lifecycle of EEG/ERP data, describing the various phases through which these data pass, from collection to publication.
In this lesson you will learn about experimental design for EEG acquisition, as well as the first phases of the EEG/ERP data lifecycle.
This lesson provides an overview of the current regulatory measures in place regarding experimental data security and privacy.
In this lesson, you will learn the appropriate methods for collection of both data and associated metadata during EEG experiments.
This lesson goes over methods for managing EEG/ERP data after it has been collected, from annotation to publication.
In this final lesson of the course, you will learn broadly about EEG signal processing, as well as specific applications which make this kind of brain signal valuable to researchers and clinicians.
This lecture on model types introduces the advantages of modeling, provide examples of different model types, and explain what modeling is all about.
This lecture summarizes the concepts introduced in Model Types I and further explains how models can be used answer different scientific questions.
This lecture focuses on how to get from a scientific question to a model using concrete examples. We will present a 10-step practical guide on how to succeed in modeling. This lecture contains links to 2 tutorials, lecture/tutorial slides, suggested reading list, and 3 recorded Q&A sessions.
This lecture formalizes modeling as a decision process that is constrained by a precise problem statement and specific model goals. We provide real-life examples on how model building is usually less linear than presented in Modeling Practice I.
This lecture focuses on the purpose of model fitting, approaches to model fitting, model fitting for linear models, and how to assess the quality and compare model fits. We will present a 10-step practical guide on how to succeed in modeling.
This lecture summarizes the concepts introduced in Model Fitting I and adds two additional concepts: 1) MLE is a frequentist way of looking at the data and the model, with its own limitations. 2) Side-by-side comparisons of bootstrapping and cross-validation.
This lecture provides an overview of the generalized linear models (GLM) course, originally a part of the Neuromatch Academy (NMA), an interactive online summer school held in 2020. NMA provided participants with experiences spanning from hands-on modeling experience to meta-science interpretation skills across just about everything that could reasonably be included in the label "computational neuroscience".