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Overview of Day 2 of this course.

Difficulty level: Beginner
Duration: 00:03:28
Speaker: : Tristan Shuman

This talk compares various sensors and resolutions for in vivo neural recordings.

Difficulty level: Beginner
Duration: 00:24:03

This hands-on tutorial explains how to run your own Minion session in the MetaCell cloud using jupityr notebooks.

Difficulty level: Beginner
Duration: 01:28:03

In this hands-on analysis tutorial, users will mimic a kernel crash and learn the steps to restore inputs in such a case.

Difficulty level: Beginner
Duration: 00:20:34
Speaker: : Phil Dong

This lesson will go through how to extract cells from video that has been cleaned of background noise and motion.

Difficulty level: Beginner
Duration: 01:49:40
Speaker: : Phil Dong

This final hands-on analysis tutorial walks users through the last visualization steps in the cellular data.

Difficulty level: Beginner
Duration: 00:27:23
Speaker: : Phil Dong

This lecture provides an introduction to optogenetics, a biological technique to control the activity of neurons or other cell types with light.

Difficulty level: Beginner
Duration: 39:34
Speaker: : Adam Packer

This lecture covers infrared LED oblique illumination for studying neuronal circuits in in vitro block-preparations of the spinal cord and brain stem.

Difficulty level: Beginner
Duration: 25:16
Speaker: : Péter Szucs

This lecture covers the application of diffusion MRI for clinical and preclinical studies.

Difficulty level: Beginner
Duration: 33:10
Speaker: : Silvia de Santis

This lesson continues with the second workshop on reproducible science, focusing on additional open source tools for researchers and data scientists, such as the R programming language for data science, as well as associated tools like RStudio and R Markdown. Additionally, users are introduced to Python and iPython notebooks, Google Colab, and are given hands-on tutorials on how to create a Binder environment, as well as various containers in Docker and Singularity.

Difficulty level: Beginner
Duration: 1:16:04

This lesson gives an in-depth introduction of ethics in the field of artificial intelligence, particularly in the context of its impact on humans and public interest. As the healthcare sector becomes increasingly affected by the implementation of ever stronger AI algorithms, this lecture covers key interests which must be protected going forward, including privacy, consent, human autonomy, inclusiveness, and equity. 

Difficulty level: Beginner
Duration: 1:22:06
Speaker: : Daniel Buchman

This lesson describes a definitional framework for fairness and health equity in the age of the algorithm. While acknowledging the impressive capability of machine learning to positively affect health equity, this talk outlines potential (and actual) pitfalls which come with such powerful tools, ultimately making the case for collaborative, interdisciplinary, and transparent science as a way to operationalize fairness in health equity. 

Difficulty level: Beginner
Duration: 1:06:35
Speaker: : Laura Sikstrom

This lecture covers different perspectives on the study of the mental, focusing on the difference between Mind and Brain. 

Difficulty level: Beginner
Duration: 1:16:30

This hands-on tutorial walks you through DataJoint platform, highlighting features and schema which can be used to build robost neuroscientific pipelines. 

Difficulty level: Beginner
Duration: 26:06
Speaker: : Milagros Marin

In this hands-on session, you will learn how to explore and work with DataLad datasets, containers, and structures using Jupyter notebooks. 

Difficulty level: Beginner
Duration: 58:05

This video shows how to use the brainlife.io interface to edit the participants' info file. This file is the ParticipantInfo.json file of the Brain Imaging Data Structure (BIDS).

Difficulty level: Beginner
Duration: 0:34
Speaker: :

This quick video presents some of the various visualizers available on brainlife.io

Difficulty level: Beginner
Duration: 1:11
Speaker: :

This video demonstrates each required step for preprocessing T1w anatomical data in brainlife.io.

Difficulty level: Beginner
Duration: 3:28
Speaker: :

This lecture will provide an overview of neuroimaging techniques and their clinical applications.

Difficulty level: Beginner
Duration: 45:29
Speaker: : Dafna Ben Bashat

This lecture gives an introduction to the types of glial cells, homeostasis (influence of cerebral blood flow and influence on neurons), insulation and protection of axons (myelin sheath; nodes of Ranvier), microglia and reactions of the CNS to injury.

Difficulty level: Beginner
Duration: 40:32