This lesson introduces the practical exercises which accompany the previous lessons on animal and human connectomes in the brain and nervous system.
This tutorial provides instruction on how to simulate brain tumors with TVB (reproducing publication: Marinazzo et al. 2020 Neuroimage). This tutorial comprises a didactic video, jupyter notebooks, and full data set for the construction of virtual brains from patients and health controls.
The tutorial on modelling strokes in TVB includes a didactic video and jupyter notebooks (reproducing publication: Falcon et al. 2016 eNeuro).
This lecture covers concepts associated with neural nets, including rotation and squashing, and is a part of the Deep Learning Course at New York University's Center for Data Science (CDS).
This lecture covers the concept of neural nets training (tools, classification with neural nets, and PyTorch implementation) and is a part of the Deep Learning Course at NYU's Center for Data Science.
This lecture discusses the concept of natural signals properties and the convolutional nets in practice and is a part of the Deep Learning Course at NYU's Center for Data Science.
This lecture covers the concept of recurrent neural networks: vanilla and gated (LSTM) and is a part of the Deep Learning Course at NYU's Center for Data Science.
This tutorial covers LV-EBM to target prop to (vanilla, denoising, contractive, variational) autoencoder and is a part of the Advanced Energy-Based Models module of the the Deep Learning Course at NYU's Center for Data Science. Prerequisites for this course include: Energy-Based Models I, Energy-Based Models II, Energy-Based Models III, Energy-Based Models IV, and an Introduction to Data Science or a Graduate Level Machine Learning course.
This tutorial covers the concepts of autoencoders, denoising encoders, and variational autoencoders (VAE) with PyTorch, as well as generative adversarial networks and code. It is a part of the Advanced energy based models modules of the the Deep Learning Course at NYU's Center for Data Science. Prerequisites for this course include: Energy-Based Models I, Energy-Based Models II, Energy-Based Models III, Energy-Based Models IV, Energy-Based Models V, and an Introduction to Data Science or a Graduate Level Machine Learning course.
This tutorial covers advanced concept of energy-based models. The lecture is a part of the Associative Memories module of the the Deep Learning Course at NYU's Center for Data Science.
This tutuorial covers the concept of graph convolutional networks and is a part of the Deep Learning Course at NYU's Center for Data Science. Prerequisites for this module include: Modules 1 - 5 of this course and an Introduction to Data Science or a Graduate Level Machine Learning course.
This lecture covers the concepts of emulation of kinematics from observations and training a policy. It is a part of the Deep Learning Course at NYU's Center for Data Science. Prerequisites for this module include: Models 1-6 of this course and an Introduction to Data Science or a Graduate Level Machine Learning course.
This tutorial introduces pipelines and methods to compute brain connectomes from fMRI data. With corresponding code and repositories, participants can follow along and learn how to programmatically preprocess, curate, and analyze functional and structural brain data to produce connectivity matrices.
This is a tutorial on designing a Bayesian inference model to map belief trajectories, with emphasis on gaining familiarity with Hierarchical Gaussian Filters (HGFs).
This lesson corresponds to slides 65-90 of the PDF below.
This lecture and tutorial focuses on measuring human functional brain networks, as well as how to account for inherent variability within those networks.