Tutorial on how to simulate brain tumor brains with TVB (reproducing publication: Marinazzo et al. 2020 Neuroimage). This tutorial comprises a didactic video, jupyter notebooks, and full data set for the construction of virtual brains from patients and health controls. Authors: Hannelore Aerts, Michael Schirner, Ben Jeurissen, DIrk Van Roost, Eric Achten, Petra Ritter, Daniele Marinazzo

Difficulty level: Intermediate

Duration: 10:01

Speaker: :

This lecture 1/15 is part of the Computational Modeling of Neuronal Plasticity Course that aims to teach users how to build a mathematical model of a neuron, its inputs, and its neuronal plasticity mechanisms, by writing your own Python program. This lecture provides users with a brief video introduction to the concepts that serves as a companion to the lecture notes and solution figures.

Authors: Florence I. Kleberg and Prof. Jochen Triesch.

Difficulty level: Intermediate

Duration: 0:40

Speaker: : Florence I. Kleberg

This lecture (2/15) is part of the Computational Modeling of Neuronal Plasticity Course that aims to teach users how to build a mathematical model of a neuron, its inputs, and its neuronal plasticity mechanisms, by writing your own Python program. This lecture provides users with a brief video introduction to the concepts that serves as a companion to the lecture notes and solution figures.

Authors: Florence I. Kleberg and Prof. Jochen Triesch.

Difficulty level: Intermediate

Duration: 1:23

Speaker: : Florence I. Kleberg

This lecture (3/15) is part of the Computational Modeling of Neuronal Plasticity Course that aims to teach users how to build a mathematical model of a neuron, its inputs, and its neuronal plasticity mechanisms, by writing your own Python program. This lecture provides users with a brief video introduction to the concepts that serves as a companion to the lecture notes and solution figures.

Authors: Florence I. Kleberg and Prof. Jochen Triesch.

Difficulty level: Intermediate

Duration: 1:20

Speaker: : Florence I. Kleberg

This lecture (4/15) is part of the Computational Modeling of Neuronal Plasticity Course that aims to teach users how to build a mathematical model of a neuron, its inputs, and its neuronal plasticity mechanisms, by writing your own Python program. This lecture provides users with a brief video introduction to the concepts that serves as a companion to the lecture notes and solution figures.

Authors: Florence I. Kleberg and Prof. Jochen Triesch.

Difficulty level: Intermediate

Duration: 1:08

Speaker: : Florence I. Kleberg

This lecture (5/15) is part of the Computational Modeling of Neuronal Plasticity Course that aims to teach users how to build a mathematical model of a neuron, its inputs, and its neuronal plasticity mechanisms, by writing your own Python program. This lecture provides users with a brief video introduction to the concepts that serves as a companion to the lecture notes and solution figures.

Authors: Florence I. Kleberg and Prof. Jochen Triesch.

Difficulty level: Intermediate

Duration: 1:18

Speaker: : Florence I. Kleberg

This lecture (6/15) is part of the Computational Modeling of Neuronal Plasticity Course that aims to teach users how to build a mathematical model of a neuron, its inputs, and its neuronal plasticity mechanisms, by writing your own Python program. This lecture provides users with a brief video introduction to the concepts that serves as a companion to the lecture notes and solution figures. Authors: Florence I. Kleberg and Prof. Jochen Triesch.

Difficulty level: Intermediate

Duration: 1:26

Speaker: : Florence I. Kleberg

This lecture (7/15) is part of the Computational Modeling of Neuronal Plasticity Course that aims to teach users how to build a mathematical model of a neuron, its inputs, and its neuronal plasticity mechanisms, by writing your own Python program. This lecture provides users with a brief video introduction to the concepts that serves as a companion to the lecture notes and solution figures.

Authors: Florence I. Kleberg and Prof. Jochen Triesch.

Difficulty level: Intermediate

Duration: 0:42

Speaker: : Florence I. Kleberg

This lecture (8/15) is part of the Computational Modeling of Neuronal Plasticity Course that aims to teach users how to build a mathematical model of a neuron, its inputs, and its neuronal plasticity mechanisms, by writing your own Python program. This lecture provides users with a brief video introduction to the concepts that serves as a companion to the lecture notes and solution figures.

Authors: Florence I. Kleberg and Prof. Jochen Triesch.

Difficulty level: Intermediate

Duration: 2:40

Speaker: : Florence I. Kleberg

This lecture (9/15) is part of the Computational Modeling of Neuronal Plasticity Course that aims to teach users how to build a mathematical model of a neuron, its inputs, and its neuronal plasticity mechanisms, by writing your own Python program. This lecture provides users with a brief video introduction to the concepts that serves as a companion to the lecture notes and solution figures.

Authors: Florence I. Kleberg and Prof. Jochen Triesch.

Difficulty level: Intermediate

Duration: 2:54

Speaker: : Florence I. Kleberg

This lecture (10/15) is part of the Computational Modeling of Neuronal Plasticity Course that aims to teach users how to build a mathematical model of a neuron, its inputs, and its neuronal plasticity mechanisms, by writing your own Python program. This lecture provides users with a brief video introduction to the concepts that serves as a companion to the lecture notes and solution figures.

Authors: Florence I. Kleberg and Prof. Jochen Triesch.

Difficulty level: Intermediate

Duration: 1:43

Speaker: : Florence I. Kleberg

This lecture (11/15) is part of the Computational Modeling of Neuronal Plasticity Course that aims to teach users how to build a mathematical model of a neuron, its inputs, and its neuronal plasticity mechanisms, by writing your own Python program. This lecture provides users with a brief video introduction to the concepts that serves as a companion to the lecture notes and solution figures.

Authors: Florence I. Kleberg and Prof. Jochen Triesch.

Difficulty level: Intermediate

Duration: 2:58

Speaker: : Florence I. Kleberg

This lecture (12/15) is part of the Computational Modeling of Neuronal Plasticity Course that aims to teach users how to build a mathematical model of a neuron, its inputs, and its neuronal plasticity mechanisms, by writing your own Python program. This lecture provides users with a brief video introduction to the concepts that serves as a companion to the lecture notes and solution figures.

Authors: Florence I. Kleberg and Prof. Jochen Triesch.

Difficulty level: Intermediate

Duration: 2:08

Speaker: : Florence I. Kleberg

This lecture (13/15) is part of the Computational Modeling of Neuronal Plasticity Course that aims to teach users how to build a mathematical model of a neuron, its inputs, and its neuronal plasticity mechanisms, by writing your own Python program. This lecture provides users with a brief video introduction to the concepts that serves as a companion to the lecture notes and solution figures. Authors: Florence I. Kleberg and Prof. Jochen Triesch.

Difficulty level: Intermediate

Duration: 1:58

Speaker: : Florence I. Kleberg

This lecture (14/15) is part of the Computational Modeling of Neuronal Plasticity Course that aims to teach users how to build a mathematical model of a neuron, its inputs, and its neuronal plasticity mechanisms, by writing your own Python program. This lecture provides users with a brief video introduction to the concepts that serves as a companion to the lecture notes and solution figures.

Authors: Florence I. Kleberg and Prof. Jochen Triesch.

Difficulty level: Intermediate

Duration: 1:40

Speaker: : Florence I. Kleberg

This lecture (15/15) is part of the Computational Modeling of Neuronal Plasticity Course that aims to teach users how to build a mathematical model of a neuron, its inputs, and its neuronal plasticity mechanisms, by writing your own Python program. This lecture provides users with a brief video introduction to the concepts that serves as a companion to the lecture notes and solution figures.

Authors: Florence I. Kleberg and Prof. Jochen Triesch.

Difficulty level: Intermediate

Duration: 0:37

Speaker: : Florence I. Kleberg

Along the example of a patient with bi-temporal epilepsy, we show step by step how to develop a Virtual Epileptic Patient (VEP) brain model and integrate patient-specific information such as brain connectivity, epileptogenic zone and MRI lesions. The patient's brain network model is then evaluated via simulation, data fitting and mathematical analysis. This lecture demonstrates how to develop novel personalized strategies towards therapy and intervention using TVB.

Difficulty level: Intermediate

Duration: 48:57

Speaker: : Julie Courtiol

This lecture focuses on higher-level simulation scenarios using stimulation protocols. We demonstrate how to build stimulation patterns in TVB, and use them in a simulation to induced activity dissipating into experimentally known resting-state networks in human and mouse brain, a well as to obtain EEG recordings reproducing empirical findings of other researchers.

Difficulty level: Intermediate

Duration: 47:14

Speaker: : Andreas Spiegler

Course:

This lecture and tutorial focuses on measuring human functional brain networks. The lecture and tutorial were part of the 2019 Neurohackademy, a 2-week hands-on summer institute in neuroimaging and data science held at the University of Washington eScience Institute.

Difficulty level: Intermediate

Duration: 50:44

Speaker: : Caterina Gratton

Course:

Lecture on functional brain parcellations and a set of tutorials on bootstrap agregation of stable clusters (BASC) for fMRI brain parcellation which were part of the 2019 Neurohackademy, a 2-week hands-on summer institute in neuroimaging and data science held at the University of Washington eScience Institute.

Difficulty level: Advanced

Duration: 50:28

Speaker: : Pierre Bellec

- Standards and Best Practices (2)
- Electroencephalography (EEG) (1)
- Magnetoencephalography (MEG) (1)
- Neuroimaging (6)
- Deep learning (14)
- Connectivity (2)
- (-) Brain networks (2)
- (-) Cloud computing (1)
- Electrophysiology (15)
- Standards and best practices (15)
- Tools (7)
- Neuronal plasticity (15)
- Clinical neuroinformatics (2)
- (-) Computational neuroscience (32)
- Data science (1)
- Open science (1)