Lesson type
Difficulty level
This lecture presents the Medical Informatics Platform's data federation in epilepsy.
Difficulty level: Intermediate
Duration: 27:09
Speaker: : Philippe Ryvlin
Explore how to setup an epileptic seizure simulation with the TVB graphical user interface. This lesson will show you how to program the epileptor model in the brain network to simulate a epileptic seizure originating in the hippocampus. It will also show how to upload and view mouse connectivity data, as well as give a short introduction to the python script interface of TVB.
Difficulty level: Intermediate
Duration: 58:06
Speaker: : Paul Triebkorn
This talk introduces data sharing initiatives in Epilepsy, particularly across Europe.
Difficulty level: Intermediate
Duration: 13:56
Speaker: : J. Helen Cross
This lecture on generating TVB ready imaging data by Paul Triebkorn is part of the TVB Node 10 series, a 4 day workshop dedicated to learning about The Virtual Brain, brain imaging, brain simulation, personalised brain models, TVB use cases, etc. TVB is a full brain simulation platform.
Difficulty level: Intermediate
Duration: 1:40:52
Speaker: : Paul Triebkorn
Learn how to create a standard extracellular electrophysiology dataset in NWB using Python
Difficulty level: Intermediate
Duration: 23:10
Speaker: : Ryan Ly
Learn how to create a standard calcium imaging dataset in NWB using Python
Difficulty level: Intermediate
Duration: 31:04
Speaker: : Ryan Ly
Learn how to create a standard intracellular electrophysiology dataset in NWB
Difficulty level: Intermediate
Duration: 20:23
Speaker: : Pamela Baker
Learn how to use the icephys-metadata extension to enter meta-data detailing your experimental paradigm
Difficulty level: Intermediate
Duration: 27:18
Speaker: : Oliver Ruebel
Learn how to build and share extensions in NWB
Difficulty level: Advanced
Duration: 20:29
Speaker: : Ryan Ly
Learn how to build custom APIs for extension
Difficulty level: Advanced
Duration: 25:40
Speaker: : Andrew Tritt
Learn how to handle writing very large data in PyNWB
Difficulty level: Advanced
Duration: 26:50
Speaker: : Andrew Tritt
Learn how to create a standard extracellular electrophysiology dataset in NWB using MATLAB
Difficulty level: Intermediate
Duration: 45:46
Speaker: : Ben Dichter
Learn how to create a standard calcium imaging dataset in NWB using MATLAB
Difficulty level: Intermediate
Duration: 39:10
Speaker: : Ben Dichter
Learn how to create a standard intracellular electrophysiology dataset in NWB
Difficulty level: Intermediate
Duration: 20:22
Speaker: : Pamela Baker
Learn how to handle writing very large data in MatNWB
Difficulty level: Advanced
Duration: 16:18
Speaker: : Ben Dichter
Overview of the Braintorm package for analyzing extracellular electrophysiology, including preprocessing, spike sorting, trial alignment, and spectrotemporal decomposition
Difficulty level: Intermediate
Duration: 47:47
Speaker: : Konstantinos Nasiotis
Overview of the CaImAn package, and demonstration of usage with NWB
Difficulty level: Intermediate
Duration: 44:37
Speaker: : Andrea Giovannucci
Overview of the SpikeInterface package, including demonstration of data loading, preprocessing, spike sorting, and comparison of spike sorters
Difficulty level: Intermediate
Duration: 1:10:28
Speaker: : Alessio Buccino
Overview of the NWBWidgets package, including coverage of different data types, and information for building custom widgets within this framework
Difficulty level: Intermediate
Duration: 47:15
Speaker: : Ben Dichter