This lesson gives an introduction to high-performance computing with the Compute Canada network, first providing an overview of use cases for HPC and then a hands-on tutorial. Though some examples might seem specific to the Calcul Québec, all computing clusters in the Compute Canada network share the same software modules and environments.
This lesson provides a short overview of the main features of the Canadian Open Neuroscience Platform (CONP) Portal, a web interface that facilitates open science for the neuroscience community by simplifying global access to and sharing of datasets and tools. The Portal internalizes the typical cycle of a research project, beginning with data acquisition, followed by data processing with published tools, and ultimately the publication of results with a link to the original dataset.
This talk presents an overview of CBRAIN, a web-based platform that allows neuroscientists to perform computationally intensive data analyses by connecting them to high-performance computing facilities across Canada and around the world.
This lecture presents an overview of functional brain parcellations, as well as a set of tutorials on bootstrap agregation of stable clusters (BASC) for fMRI brain parcellation.
This lecture covers FAIR atlases, including their background and construction, as well as how they can be created in line with the FAIR principles.
This lesson gives a description of the BrainHealth Databank, a repository of many types of health-related data, whose aim is to accelerate research, improve care, and to help better understand and diagnose mental illness, as well as develop new treatments and prevention strategies.
This lesson corresponds to slides 46-78 of the PDF below.
This lecture covers a wide range of aspects regarding neuroinformatics and data governance, describing both their historical developments and current trajectories. Particular tools, platforms, and standards to make your research more FAIR are also discussed.
This lecture covers how to make modeling workflows FAIR by working through a practical example, dissecting the steps within the workflow, and detailing the tools and resources used at each step.
This lecture focuses on the structured validation process within computational neuroscience, including the tools, services, and methods involved in simulation and analysis.
This lecture discusses the FAIR principles as they apply to electrophysiology data and metadata, the building blocks for community tools and standards, platforms and grassroots initiatives, and the challenges therein.
This session provides users with an introduction to tools and resources that facilitate the implementation of FAIR in their research.
This session will include presentations of infrastructure that embrace the FAIR principles developed by members of the INCF Community.
This lecture provides an overview of The Virtual Brain Simulation Platform.
This lesson gives a tour of how popular virtualization tools like Docker and Singularity are playing a crucial role in improving reproducibility and enabling high-performance computing in neuroscience.
In this talk, challenges of handling complex neuroscientific data are discussed, as well as tools and services for the annotation, organization, storage, and sharing of these data.
This lecture describes the neuroscience data respository G-Node Infrastructure (GIN), which provides platform independent data access and enables easy data publishing.
This lecture covers the ethical implications of the use of brain-computer interfaces, brain-machine interfaces, and deep brain stimulation to enhance brain functions and was part of the Neuro Day Workshop held by the NeuroSchool of Aix Marseille University.
This module covers many types of invasive neurotechnology devices/interfaces for the central and peripheral nervous systems. Invasive neurotech devices are crucial, as they often provide the greatest accuracy and long-term use applicability.
This lecture covers advanced concepts of energy-based models. The lecture is a part of the Advanced Energy-Based Models module of the the Deep Learning Course at NYU's Center for Data Science. Prerequisites for this course include: Energy-Based Models I, Energy-Based Models II, and an Introduction to Data Science or a Graduate Level Machine Learning course.
This lecture covers advanced concept of energy based models. The lecture is a part of the Advanced energy based models modules of the the Deep Learning Course at NYU's Center for Data Science. Prerequisites for this course include: Energy-Based Models I, Energy-Based Models II, Energy-Based Models III, and an Introduction to Data Science or a Graduate Level Machine Learning course.
This lecture covers advanced concepts of energy-based models. The lecture is a part of the Advanced energy based models modules of the the Deep Learning Course at NYU's Center for Data Science. Prerequisites for this course include: Energy-Based Models I, Energy-Based Models II, Energy-Based Models III, and an Introduction to Data Science or a Graduate Level Machine Learning course.