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This lightning talk gives an outline of the DataLad ecosystem for large-scale collaborations, and how DataLad addresses challenges that may arise in such research cooperations.

Difficulty level: Beginner
Duration: 2:54

This talk gives a brief overview of current efforts to collect and share the Brain Reference Architecture (BRA) data involved in the construction of a whole-brain architecture that assigns functions to major brain organs. 

Difficulty level: Beginner
Duration: 4:02

This brief talk covers an analysis technique for multi-band, multi-echo fMRI data, applying a denoising framework which can be used in an automated pipeline.  

Difficulty level: Beginner
Duration: 4:45
Speaker: : David Abbott

In this lightning talk, you will learn about BrainGlobe, an initiative which exists to facilitate the development of interoperable Python-based tools for computational neuroanatomy.

Difficulty level: Beginner
Duration: 3:33

This lesson is the first part of a three-part series on the development of neuroinformatic infrastructure to ensure compliance with European data privacy standards and laws. 

Difficulty level: Beginner
Duration: 1:10:05
Speaker: : Michael Schirner

This is the second of three lectures around current challenges and opportunities facing neuroinformatic infrastructure for handling sensitive data. 

Difficulty level: Beginner
Duration: 48:26
Speaker: : Michael Schirner

This lesson gives a quick introduction to the rest of this course, Research Workflows for Collaborative Neuroscience

Difficulty level: Beginner
Duration: 3:23
Speaker: : Dimitri Yatsenko

This lesson provides an overview of how to conceptualize, design, implement, and maintain neuroscientific pipelines in via the cloud-based computational reproducibility platform Code Ocean. 

Difficulty level: Beginner
Duration: 17:01
Speaker: : David Feng

In this workshop talk, you will receive a tour of the Code Ocean ScienceOps Platform, a centralized cloud workspace for all teams. 

Difficulty level: Beginner
Duration: 10:24
Speaker: : Frank Zappulla

This lesson provides an overview of how to construct computational pipelines for neurophysiological data using DataJoint.

Difficulty level: Beginner
Duration: 17:37
Speaker: : Dimitri Yatsenko

This talk describes approaches to maintaining integrated workflows and data management schema, taking advantage of the many open source, collaborative platforms already existing.

Difficulty level: Beginner
Duration: 15:15
Speaker: : Erik C. Johnson

This hands-on tutorial walks you through DataJoint platform, highlighting features and schema which can be used to build robost neuroscientific pipelines. 

Difficulty level: Beginner
Duration: 26:06
Speaker: : Milagros Marin

This lesson consists of a panel discussion, wrapping up the INCF Neuroinformatics Assembly 2023 workshop Research Workflows for Collaborative Neuroscience

Difficulty level: Beginner
Duration: 25:33
Speaker: :

This lesson provides an introduction to the DataLad, a free and open source distributed data management system that keeps track of your data, creates structure, ensures reproducibility, supports collaboration, and integrates with widely used data infrastructure.

Difficulty level: Beginner
Duration: 22:56

This lesson introduces several open science tools like Docker and Apptainer which can be used to develop portable and reproducible software environments. 

Difficulty level: Beginner
Duration: 17:22
Speaker: : Joanes Grandjean

In this hands-on session, you will learn how to explore and work with DataLad datasets, containers, and structures using Jupyter notebooks. 

Difficulty level: Beginner
Duration: 58:05

This talk describes the challenges in sharing personal, and in particular, health data, such as data anonymization and maintaining GDPR compliance. 

Difficulty level: Beginner
Duration: 15:57
Speaker: : Petra Ritter

This lecture provides a detailed description of how to incorporate HED annotation into your neuroimaging data pipeline. 

Difficulty level: Beginner
Duration: 33:36
Speaker: : Dung Truong

This talk covers the differences between applying HED annotation to fMRI datasets versus other neuroimaging practices, and also introduces an analysis pipeline using HED tags. 

Difficulty level: Beginner
Duration: 22:52
Speaker: : Monique Denissen