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Using the UCSC Genome Browser Data Integrator

Difficulty level
Beginner
Duration
6:24
Topic

This tutorial demonstrates the Data Integrator, a tool that allows combination and intersection of data from up to five primary tables. In the example, data are extracted showing SNPs, genes and phenotypes from a genomic region.

Topics covered in this lesson
  • Set up the Genome Browser
  • Set gene track to show single isoform
  • Display phenotype tracks
  • Set up Data Integrator
  • Add datasets to Data Integrator
  • Choose data fields to export
  • Load data into spreadsheet