Andrea Giovannucci - Miniscope User and Developer Talk
Andrea Giovannucci - Miniscope User and Developer Talk
"Online 1-photon vs 2-photon calcium imaging data analysis: Current developments and future plans" was presented by Andrea Giovannucci at the 2021 Virtual Miniscope Workshop as part of a series of talks by leading Miniscope users and developers.
Topics covered in this lesson
- Outline
- 2p and 1p calcium imaging
- Batch and online processing
- Online experiments with fluorescence imaging
- Requirements for cellular brain imaging analysis
- Motion correction: Simple trick
- Constrained NMF: Representing neurons
- Constrained NMF: Summary
- The background is highly contaminated
- Parameter sharing to reduce complexity
- Results on simulated data
- FIOLA: Ultrafast analysis
- Acknowledgments
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